Protein–RNA interactions for Protein: Q9H6W3

RIOX1, Ribosomal oxygenase 1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIOX1Q9H6W3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.14■■■□□ 2.42
RIOX1Q9H6W3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
RIOX1Q9H6W3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.13■■■□□ 2.41
RIOX1Q9H6W3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.13■■■□□ 2.41
RIOX1Q9H6W3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.13■■■□□ 2.41
RIOX1Q9H6W3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
RIOX1Q9H6W3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
RIOX1Q9H6W3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
RIOX1Q9H6W3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.12■■■□□ 2.41
RIOX1Q9H6W3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RIOX1Q9H6W3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RIOX1Q9H6W3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.1■■■□□ 2.41
RIOX1Q9H6W3 LINC00273-201ENST00000539813 1452 ntBASIC30.1■■■□□ 2.41
RIOX1Q9H6W3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.1■■■□□ 2.41
RIOX1Q9H6W3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.07■■■□□ 2.4
RIOX1Q9H6W3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
RIOX1Q9H6W3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
RIOX1Q9H6W3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RIOX1Q9H6W3 ABCB10P1-201ENST00000614297 2181 ntBASIC30.06■■■□□ 2.4
RIOX1Q9H6W3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
RIOX1Q9H6W3 LINC01971-201ENST00000617888 1048 ntBASIC30.05■■■□□ 2.4
RIOX1Q9H6W3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RIOX1Q9H6W3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
RIOX1Q9H6W3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
RIOX1Q9H6W3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
RIOX1Q9H6W3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.02■■■□□ 2.4
RIOX1Q9H6W3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RIOX1Q9H6W3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
RIOX1Q9H6W3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.02■■■□□ 2.4
RIOX1Q9H6W3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
RIOX1Q9H6W3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
RIOX1Q9H6W3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RIOX1Q9H6W3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
RIOX1Q9H6W3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30■■■□□ 2.39
RIOX1Q9H6W3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30■■■□□ 2.39
RIOX1Q9H6W3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RIOX1Q9H6W3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RIOX1Q9H6W3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.99■■■□□ 2.39
RIOX1Q9H6W3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.99■■■□□ 2.39
RIOX1Q9H6W3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
RIOX1Q9H6W3 AC135983.2-203ENST00000454486 1613 ntBASIC29.97■■■□□ 2.39
RIOX1Q9H6W3 DUX4L11-201ENST00000611504 1267 ntBASIC29.97■■■□□ 2.39
RIOX1Q9H6W3 DUX4L12-201ENST00000614593 1267 ntBASIC29.97■■■□□ 2.39
RIOX1Q9H6W3 DUX4L14-201ENST00000621227 1267 ntBASIC29.97■■■□□ 2.39
RIOX1Q9H6W3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RIOX1Q9H6W3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.96■■■□□ 2.39
RIOX1Q9H6W3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.96■■■□□ 2.39
RIOX1Q9H6W3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC29.95■■■□□ 2.39
RIOX1Q9H6W3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.38
RIOX1Q9H6W3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
RIOX1Q9H6W3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
RIOX1Q9H6W3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.94■■■□□ 2.38
RIOX1Q9H6W3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.94■■■□□ 2.38
RIOX1Q9H6W3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
RIOX1Q9H6W3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
RIOX1Q9H6W3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.93■■■□□ 2.38
RIOX1Q9H6W3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
RIOX1Q9H6W3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
RIOX1Q9H6W3 WHAMMP2-203ENST00000563942 1603 ntBASIC29.91■■■□□ 2.38
RIOX1Q9H6W3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
RIOX1Q9H6W3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC29.91■■■□□ 2.38
RIOX1Q9H6W3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.9■■■□□ 2.38
RIOX1Q9H6W3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.9■■■□□ 2.38
RIOX1Q9H6W3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
RIOX1Q9H6W3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
RIOX1Q9H6W3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.89■■■□□ 2.38
RIOX1Q9H6W3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.89■■■□□ 2.38
RIOX1Q9H6W3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC29.89■■■□□ 2.37
RIOX1Q9H6W3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RIOX1Q9H6W3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
RIOX1Q9H6W3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.88■■■□□ 2.37
RIOX1Q9H6W3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC29.88■■■□□ 2.37
RIOX1Q9H6W3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RIOX1Q9H6W3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.87■■■□□ 2.37
RIOX1Q9H6W3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.87■■■□□ 2.37
RIOX1Q9H6W3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RIOX1Q9H6W3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
RIOX1Q9H6W3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RIOX1Q9H6W3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.86■■■□□ 2.37
RIOX1Q9H6W3 DUX4L13-201ENST00000554103 1267 ntBASIC29.86■■■□□ 2.37
RIOX1Q9H6W3 DUX4L15-201ENST00000611059 1267 ntBASIC29.86■■■□□ 2.37
RIOX1Q9H6W3 DUX4L23-201ENST00000615195 1269 ntBASIC29.86■■■□□ 2.37
RIOX1Q9H6W3 DUX4L24-201ENST00000617576 1269 ntBASIC29.86■■■□□ 2.37
RIOX1Q9H6W3 DUX4L22-201ENST00000618238 1269 ntBASIC29.86■■■□□ 2.37
RIOX1Q9H6W3 DUX4L20-201ENST00000619712 1269 ntBASIC29.86■■■□□ 2.37
RIOX1Q9H6W3 DUX4L21-201ENST00000622058 1269 ntBASIC29.86■■■□□ 2.37
RIOX1Q9H6W3 DUX4L10-201ENST00000622460 1267 ntBASIC29.86■■■□□ 2.37
RIOX1Q9H6W3 DUX4L25-201ENST00000624915 1269 ntBASIC29.86■■■□□ 2.37
RIOX1Q9H6W3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
RIOX1Q9H6W3 MIR3648-2-201ENST00000581792 180 ntBASIC29.85■■■□□ 2.37
RIOX1Q9H6W3 MIR3648-1-201ENST00000615959 180 ntBASIC29.85■■■□□ 2.37
RIOX1Q9H6W3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
RIOX1Q9H6W3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.85■■■□□ 2.37
RIOX1Q9H6W3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
RIOX1Q9H6W3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RIOX1Q9H6W3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.84■■■□□ 2.37
RIOX1Q9H6W3 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.84■■■□□ 2.37
RIOX1Q9H6W3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
RIOX1Q9H6W3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
RIOX1Q9H6W3 AP004833.2-201ENST00000532228 1454 ntBASIC29.83■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms