Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.03■■■□□ 2.08
NUCKS1Q9H1E3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
NUCKS1Q9H1E3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.02■■■□□ 2.08
NUCKS1Q9H1E3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
NUCKS1Q9H1E3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
NUCKS1Q9H1E3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
NUCKS1Q9H1E3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.08
NUCKS1Q9H1E3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
NUCKS1Q9H1E3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
NUCKS1Q9H1E3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28■■■□□ 2.07
NUCKS1Q9H1E3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
NUCKS1Q9H1E3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
NUCKS1Q9H1E3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
NUCKS1Q9H1E3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
NUCKS1Q9H1E3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
NUCKS1Q9H1E3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
NUCKS1Q9H1E3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
NUCKS1Q9H1E3 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.95■■■□□ 2.07
NUCKS1Q9H1E3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
NUCKS1Q9H1E3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.95■■■□□ 2.06
NUCKS1Q9H1E3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
NUCKS1Q9H1E3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
NUCKS1Q9H1E3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
NUCKS1Q9H1E3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
NUCKS1Q9H1E3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
NUCKS1Q9H1E3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
NUCKS1Q9H1E3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.94■■■□□ 2.06
NUCKS1Q9H1E3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
NUCKS1Q9H1E3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
NUCKS1Q9H1E3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
NUCKS1Q9H1E3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.92■■■□□ 2.06
NUCKS1Q9H1E3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
NUCKS1Q9H1E3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
NUCKS1Q9H1E3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
NUCKS1Q9H1E3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.91■■■□□ 2.06
NUCKS1Q9H1E3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.9■■■□□ 2.06
NUCKS1Q9H1E3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
NUCKS1Q9H1E3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
NUCKS1Q9H1E3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.9■■■□□ 2.06
NUCKS1Q9H1E3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.89■■■□□ 2.06
NUCKS1Q9H1E3 MIR762-201ENST00000390236 83 ntBASIC27.89■■■□□ 2.06
NUCKS1Q9H1E3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.05
NUCKS1Q9H1E3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.05
NUCKS1Q9H1E3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.89■■■□□ 2.05
NUCKS1Q9H1E3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
NUCKS1Q9H1E3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.05
NUCKS1Q9H1E3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
NUCKS1Q9H1E3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
NUCKS1Q9H1E3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.87■■■□□ 2.05
NUCKS1Q9H1E3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
NUCKS1Q9H1E3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
NUCKS1Q9H1E3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.86■■■□□ 2.05
NUCKS1Q9H1E3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
NUCKS1Q9H1E3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.86■■■□□ 2.05
NUCKS1Q9H1E3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
NUCKS1Q9H1E3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.86■■■□□ 2.05
NUCKS1Q9H1E3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
NUCKS1Q9H1E3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.86■■■□□ 2.05
NUCKS1Q9H1E3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
NUCKS1Q9H1E3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC27.85■■■□□ 2.05
NUCKS1Q9H1E3 AL162393.1-201ENST00000437852 946 ntBASIC27.85■■■□□ 2.05
NUCKS1Q9H1E3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.85■■■□□ 2.05
NUCKS1Q9H1E3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
NUCKS1Q9H1E3 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.85■■■□□ 2.05
NUCKS1Q9H1E3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
NUCKS1Q9H1E3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
NUCKS1Q9H1E3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.84■■■□□ 2.05
NUCKS1Q9H1E3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.84■■■□□ 2.05
NUCKS1Q9H1E3 AC127502.1-201ENST00000399971 1502 ntBASIC27.84■■■□□ 2.05
NUCKS1Q9H1E3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.84■■■□□ 2.05
NUCKS1Q9H1E3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.84■■■□□ 2.05
NUCKS1Q9H1E3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
NUCKS1Q9H1E3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.84■■■□□ 2.05
NUCKS1Q9H1E3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
NUCKS1Q9H1E3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
NUCKS1Q9H1E3 AP006261.1-201ENST00000584783 668 ntBASIC27.83■■■□□ 2.05
NUCKS1Q9H1E3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.83■■■□□ 2.05
NUCKS1Q9H1E3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
NUCKS1Q9H1E3 RPS2P35-201ENST00000443417 897 ntBASIC27.82■■■□□ 2.04
NUCKS1Q9H1E3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
NUCKS1Q9H1E3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
NUCKS1Q9H1E3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
NUCKS1Q9H1E3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27.82■■■□□ 2.04
NUCKS1Q9H1E3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
NUCKS1Q9H1E3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
NUCKS1Q9H1E3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
NUCKS1Q9H1E3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
NUCKS1Q9H1E3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
NUCKS1Q9H1E3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
NUCKS1Q9H1E3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
NUCKS1Q9H1E3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.79■■■□□ 2.04
NUCKS1Q9H1E3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.79■■■□□ 2.04
NUCKS1Q9H1E3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
NUCKS1Q9H1E3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
NUCKS1Q9H1E3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.78■■■□□ 2.04
NUCKS1Q9H1E3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
NUCKS1Q9H1E3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
NUCKS1Q9H1E3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
NUCKS1Q9H1E3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.78■■■□□ 2.04
NUCKS1Q9H1E3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms