Protein–RNA interactions for Protein: Q9BRS2

RIOK1, Serine/threonine-protein kinase RIO1, humanhuman

Known RBP Predictions only

Length 568 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK1Q9BRS2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RIOK1Q9BRS2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.23■■■□□ 2.59
RIOK1Q9BRS2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RIOK1Q9BRS2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.22■■■□□ 2.59
RIOK1Q9BRS2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RIOK1Q9BRS2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.22■■■□□ 2.59
RIOK1Q9BRS2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.22■■■□□ 2.59
RIOK1Q9BRS2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
RIOK1Q9BRS2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
RIOK1Q9BRS2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RIOK1Q9BRS2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RIOK1Q9BRS2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.18■■■□□ 2.58
RIOK1Q9BRS2 HLA-V-202ENST00000446817 847 ntBASIC31.18■■■□□ 2.58
RIOK1Q9BRS2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.18■■■□□ 2.58
RIOK1Q9BRS2 MIR3648-2-201ENST00000581792 180 ntBASIC31.18■■■□□ 2.58
RIOK1Q9BRS2 MIR3648-1-201ENST00000615959 180 ntBASIC31.18■■■□□ 2.58
RIOK1Q9BRS2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RIOK1Q9BRS2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.17■■■□□ 2.58
RIOK1Q9BRS2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.17■■■□□ 2.58
RIOK1Q9BRS2 CR559946.2-201ENST00000623684 991 ntBASIC31.17■■■□□ 2.58
RIOK1Q9BRS2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RIOK1Q9BRS2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
RIOK1Q9BRS2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.16■■■□□ 2.58
RIOK1Q9BRS2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.15■■■□□ 2.58
RIOK1Q9BRS2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
RIOK1Q9BRS2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
RIOK1Q9BRS2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
RIOK1Q9BRS2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.14■■■□□ 2.58
RIOK1Q9BRS2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
RIOK1Q9BRS2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.57
RIOK1Q9BRS2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
RIOK1Q9BRS2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RIOK1Q9BRS2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RIOK1Q9BRS2 AC016575.1-201ENST00000607026 382 ntBASIC31.12■■■□□ 2.57
RIOK1Q9BRS2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.12■■■□□ 2.57
RIOK1Q9BRS2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
RIOK1Q9BRS2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.11■■■□□ 2.57
RIOK1Q9BRS2 DUX4L13-201ENST00000554103 1267 ntBASIC31.11■■■□□ 2.57
RIOK1Q9BRS2 DUX4L15-201ENST00000611059 1267 ntBASIC31.11■■■□□ 2.57
RIOK1Q9BRS2 DUX4L23-201ENST00000615195 1269 ntBASIC31.11■■■□□ 2.57
RIOK1Q9BRS2 DUX4L24-201ENST00000617576 1269 ntBASIC31.11■■■□□ 2.57
RIOK1Q9BRS2 DUX4L22-201ENST00000618238 1269 ntBASIC31.11■■■□□ 2.57
RIOK1Q9BRS2 DUX4L20-201ENST00000619712 1269 ntBASIC31.11■■■□□ 2.57
RIOK1Q9BRS2 DUX4L21-201ENST00000622058 1269 ntBASIC31.11■■■□□ 2.57
RIOK1Q9BRS2 DUX4L10-201ENST00000622460 1267 ntBASIC31.11■■■□□ 2.57
RIOK1Q9BRS2 DUX4L25-201ENST00000624915 1269 ntBASIC31.11■■■□□ 2.57
RIOK1Q9BRS2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.1■■■□□ 2.57
RIOK1Q9BRS2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.1■■■□□ 2.57
RIOK1Q9BRS2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.1■■■□□ 2.57
RIOK1Q9BRS2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
RIOK1Q9BRS2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
RIOK1Q9BRS2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
RIOK1Q9BRS2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RIOK1Q9BRS2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.08■■■□□ 2.57
RIOK1Q9BRS2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.08■■■□□ 2.57
RIOK1Q9BRS2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
RIOK1Q9BRS2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.08■■■□□ 2.57
RIOK1Q9BRS2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.08■■■□□ 2.57
RIOK1Q9BRS2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
RIOK1Q9BRS2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.07■■■□□ 2.56
RIOK1Q9BRS2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.07■■■□□ 2.56
RIOK1Q9BRS2 AC135983.2-203ENST00000454486 1613 ntBASIC31.06■■■□□ 2.56
RIOK1Q9BRS2 MIR639-201ENST00000384974 98 ntBASIC31.06■■■□□ 2.56
RIOK1Q9BRS2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
RIOK1Q9BRS2 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.06■■■□□ 2.56
RIOK1Q9BRS2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RIOK1Q9BRS2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.06■■■□□ 2.56
RIOK1Q9BRS2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RIOK1Q9BRS2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RIOK1Q9BRS2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RIOK1Q9BRS2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RIOK1Q9BRS2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.05■■■□□ 2.56
RIOK1Q9BRS2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RIOK1Q9BRS2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RIOK1Q9BRS2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RIOK1Q9BRS2 WHAMMP2-203ENST00000563942 1603 ntBASIC31.04■■■□□ 2.56
RIOK1Q9BRS2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
RIOK1Q9BRS2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
RIOK1Q9BRS2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
RIOK1Q9BRS2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.02■■■□□ 2.56
RIOK1Q9BRS2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
RIOK1Q9BRS2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
RIOK1Q9BRS2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.99■■■□□ 2.55
RIOK1Q9BRS2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
RIOK1Q9BRS2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
RIOK1Q9BRS2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
RIOK1Q9BRS2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
RIOK1Q9BRS2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
RIOK1Q9BRS2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
RIOK1Q9BRS2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.97■■■□□ 2.55
RIOK1Q9BRS2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
RIOK1Q9BRS2 MIR4449-201ENST00000578365 66 ntBASIC30.96■■■□□ 2.55
RIOK1Q9BRS2 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.95■■■□□ 2.55
RIOK1Q9BRS2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
RIOK1Q9BRS2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
RIOK1Q9BRS2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
RIOK1Q9BRS2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
RIOK1Q9BRS2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
RIOK1Q9BRS2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
RIOK1Q9BRS2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.89■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms