Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
ABCA3Q99758 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC35.69■■■■□ 3.3
ABCA3Q99758 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
ABCA3Q99758 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
ABCA3Q99758 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
ABCA3Q99758 CEP120-209ENST00000515110 606 ntTSL 3 BASIC35.65■■■■□ 3.3
ABCA3Q99758 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
ABCA3Q99758 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
ABCA3Q99758 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC35.63■■■■□ 3.29
ABCA3Q99758 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
ABCA3Q99758 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC35.63■■■■□ 3.29
ABCA3Q99758 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC35.63■■■■□ 3.29
ABCA3Q99758 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
ABCA3Q99758 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
ABCA3Q99758 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
ABCA3Q99758 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
ABCA3Q99758 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC35.6■■■■□ 3.29
ABCA3Q99758 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC35.59■■■■□ 3.29
ABCA3Q99758 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC35.59■■■■□ 3.29
ABCA3Q99758 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
ABCA3Q99758 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
ABCA3Q99758 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC35.58■■■■□ 3.29
ABCA3Q99758 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC35.57■■■■□ 3.29
ABCA3Q99758 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC35.57■■■■□ 3.29
ABCA3Q99758 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
ABCA3Q99758 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC35.57■■■■□ 3.28
ABCA3Q99758 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
ABCA3Q99758 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC35.54■■■■□ 3.28
ABCA3Q99758 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC35.53■■■■□ 3.28
ABCA3Q99758 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC35.53■■■■□ 3.28
ABCA3Q99758 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
ABCA3Q99758 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC35.52■■■■□ 3.28
ABCA3Q99758 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC35.52■■■■□ 3.28
ABCA3Q99758 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC35.51■■■■□ 3.27
ABCA3Q99758 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
ABCA3Q99758 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC35.51■■■■□ 3.27
ABCA3Q99758 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC35.51■■■■□ 3.27
ABCA3Q99758 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC35.51■■■■□ 3.27
ABCA3Q99758 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC35.5■■■■□ 3.27
ABCA3Q99758 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
ABCA3Q99758 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC35.5■■■■□ 3.27
ABCA3Q99758 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
ABCA3Q99758 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
ABCA3Q99758 AC008813.1-201ENST00000536597 885 ntBASIC35.49■■■■□ 3.27
ABCA3Q99758 GFER-205ENST00000569451 517 ntTSL 5 BASIC35.49■■■■□ 3.27
ABCA3Q99758 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
ABCA3Q99758 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
ABCA3Q99758 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
ABCA3Q99758 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
ABCA3Q99758 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
ABCA3Q99758 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
ABCA3Q99758 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
ABCA3Q99758 AC022413.1-201ENST00000624602 984 ntBASIC35.45■■■■□ 3.27
ABCA3Q99758 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC35.43■■■■□ 3.26
ABCA3Q99758 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC35.42■■■■□ 3.26
ABCA3Q99758 AC018358.1-201ENST00000631079 1402 ntBASIC35.42■■■■□ 3.26
ABCA3Q99758 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC35.41■■■■□ 3.26
ABCA3Q99758 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC35.41■■■■□ 3.26
ABCA3Q99758 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC35.41■■■■□ 3.26
ABCA3Q99758 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
ABCA3Q99758 AC060814.1-201ENST00000554326 538 ntBASIC35.4■■■■□ 3.26
ABCA3Q99758 AL033527.3-201ENST00000566366 1196 ntBASIC35.4■■■■□ 3.26
ABCA3Q99758 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC35.4■■■■□ 3.26
ABCA3Q99758 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
ABCA3Q99758 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC35.39■■■■□ 3.26
ABCA3Q99758 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC35.39■■■■□ 3.26
ABCA3Q99758 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC35.39■■■■□ 3.26
ABCA3Q99758 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC35.39■■■■□ 3.26
ABCA3Q99758 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC35.37■■■■□ 3.25
ABCA3Q99758 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC35.37■■■■□ 3.25
ABCA3Q99758 HES4-202ENST00000428771 1040 ntTSL 2 BASIC35.37■■■■□ 3.25
ABCA3Q99758 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
ABCA3Q99758 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
ABCA3Q99758 AC010864.1-201ENST00000609407 1511 ntBASIC35.35■■■■□ 3.25
ABCA3Q99758 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
ABCA3Q99758 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
ABCA3Q99758 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC35.34■■■■□ 3.25
ABCA3Q99758 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
ABCA3Q99758 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC35.34■■■■□ 3.25
ABCA3Q99758 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC35.34■■■■□ 3.25
ABCA3Q99758 U85056.1-201ENST00000616429 682 ntBASIC35.34■■■■□ 3.25
ABCA3Q99758 HYI-213ENST00000583037 1322 ntTSL 5 BASIC35.33■■■■□ 3.25
ABCA3Q99758 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
ABCA3Q99758 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC35.32■■■■□ 3.25
ABCA3Q99758 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
ABCA3Q99758 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
ABCA3Q99758 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
ABCA3Q99758 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
ABCA3Q99758 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC35.31■■■■□ 3.24
ABCA3Q99758 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC35.3■■■■□ 3.24
ABCA3Q99758 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC35.29■■■■□ 3.24
ABCA3Q99758 KRT18P60-201ENST00000312876 1297 ntBASIC35.29■■■■□ 3.24
ABCA3Q99758 AC148477.6-201ENST00000623746 465 ntBASIC35.29■■■■□ 3.24
ABCA3Q99758 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC35.28■■■■□ 3.24
ABCA3Q99758 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC35.28■■■■□ 3.24
ABCA3Q99758 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC35.28■■■■□ 3.24
ABCA3Q99758 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC35.28■■■■□ 3.24
ABCA3Q99758 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
ABCA3Q99758 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC35.27■■■■□ 3.24
ABCA3Q99758 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms