Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CDK5RAP1Q96SZ6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CDK5RAP1Q96SZ6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.1■■□□□ 1.93
CDK5RAP1Q96SZ6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CDK5RAP1Q96SZ6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CDK5RAP1Q96SZ6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CDK5RAP1Q96SZ6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.08■■□□□ 1.93
CDK5RAP1Q96SZ6 ST7-AS1-201ENST00000456775 1889 ntBASIC27.08■■□□□ 1.93
CDK5RAP1Q96SZ6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CDK5RAP1Q96SZ6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.08■■□□□ 1.93
CDK5RAP1Q96SZ6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.08■■□□□ 1.93
CDK5RAP1Q96SZ6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
CDK5RAP1Q96SZ6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
CDK5RAP1Q96SZ6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CDK5RAP1Q96SZ6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.06■■□□□ 1.92
CDK5RAP1Q96SZ6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.05■■□□□ 1.92
CDK5RAP1Q96SZ6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CDK5RAP1Q96SZ6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.05■■□□□ 1.92
CDK5RAP1Q96SZ6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.05■■□□□ 1.92
CDK5RAP1Q96SZ6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.04■■□□□ 1.92
CDK5RAP1Q96SZ6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CDK5RAP1Q96SZ6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.03■■□□□ 1.92
CDK5RAP1Q96SZ6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
CDK5RAP1Q96SZ6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDK5RAP1Q96SZ6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
CDK5RAP1Q96SZ6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CDK5RAP1Q96SZ6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.02■■□□□ 1.92
CDK5RAP1Q96SZ6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CDK5RAP1Q96SZ6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDK5RAP1Q96SZ6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.01■■□□□ 1.91
CDK5RAP1Q96SZ6 HLA-V-202ENST00000446817 847 ntBASIC27■■□□□ 1.91
CDK5RAP1Q96SZ6 DUX4L13-201ENST00000554103 1267 ntBASIC27■■□□□ 1.91
CDK5RAP1Q96SZ6 DUX4L15-201ENST00000611059 1267 ntBASIC27■■□□□ 1.91
CDK5RAP1Q96SZ6 DUX4L23-201ENST00000615195 1269 ntBASIC27■■□□□ 1.91
CDK5RAP1Q96SZ6 DUX4L24-201ENST00000617576 1269 ntBASIC27■■□□□ 1.91
CDK5RAP1Q96SZ6 DUX4L22-201ENST00000618238 1269 ntBASIC27■■□□□ 1.91
CDK5RAP1Q96SZ6 DUX4L20-201ENST00000619712 1269 ntBASIC27■■□□□ 1.91
CDK5RAP1Q96SZ6 DUX4L21-201ENST00000622058 1269 ntBASIC27■■□□□ 1.91
CDK5RAP1Q96SZ6 DUX4L10-201ENST00000622460 1267 ntBASIC27■■□□□ 1.91
CDK5RAP1Q96SZ6 DUX4L25-201ENST00000624915 1269 ntBASIC27■■□□□ 1.91
CDK5RAP1Q96SZ6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
CDK5RAP1Q96SZ6 MIR3648-2-201ENST00000581792 180 ntBASIC26.99■■□□□ 1.91
CDK5RAP1Q96SZ6 MIR3648-1-201ENST00000615959 180 ntBASIC26.99■■□□□ 1.91
CDK5RAP1Q96SZ6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CDK5RAP1Q96SZ6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CDK5RAP1Q96SZ6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.97■■□□□ 1.91
CDK5RAP1Q96SZ6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDK5RAP1Q96SZ6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDK5RAP1Q96SZ6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.97■■□□□ 1.91
CDK5RAP1Q96SZ6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.96■■□□□ 1.91
CDK5RAP1Q96SZ6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.96■■□□□ 1.91
CDK5RAP1Q96SZ6 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.95■■□□□ 1.9
CDK5RAP1Q96SZ6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CDK5RAP1Q96SZ6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDK5RAP1Q96SZ6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDK5RAP1Q96SZ6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDK5RAP1Q96SZ6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.94■■□□□ 1.9
CDK5RAP1Q96SZ6 CR559946.2-201ENST00000623684 991 ntBASIC26.94■■□□□ 1.9
CDK5RAP1Q96SZ6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CDK5RAP1Q96SZ6 AC135983.2-203ENST00000454486 1613 ntBASIC26.94■■□□□ 1.9
CDK5RAP1Q96SZ6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CDK5RAP1Q96SZ6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.93■■□□□ 1.9
CDK5RAP1Q96SZ6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.93■■□□□ 1.9
CDK5RAP1Q96SZ6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDK5RAP1Q96SZ6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.93■■□□□ 1.9
CDK5RAP1Q96SZ6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDK5RAP1Q96SZ6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDK5RAP1Q96SZ6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDK5RAP1Q96SZ6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDK5RAP1Q96SZ6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.91■■□□□ 1.9
CDK5RAP1Q96SZ6 AC016575.1-201ENST00000607026 382 ntBASIC26.91■■□□□ 1.9
CDK5RAP1Q96SZ6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDK5RAP1Q96SZ6 MIR639-201ENST00000384974 98 ntBASIC26.9■■□□□ 1.9
CDK5RAP1Q96SZ6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
CDK5RAP1Q96SZ6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CDK5RAP1Q96SZ6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.9
CDK5RAP1Q96SZ6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.89
CDK5RAP1Q96SZ6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDK5RAP1Q96SZ6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CDK5RAP1Q96SZ6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDK5RAP1Q96SZ6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.87■■□□□ 1.89
CDK5RAP1Q96SZ6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
CDK5RAP1Q96SZ6 WHAMMP2-203ENST00000563942 1603 ntBASIC26.87■■□□□ 1.89
CDK5RAP1Q96SZ6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CDK5RAP1Q96SZ6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.86■■□□□ 1.89
CDK5RAP1Q96SZ6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDK5RAP1Q96SZ6 AP004833.2-201ENST00000532228 1454 ntBASIC26.86■■□□□ 1.89
CDK5RAP1Q96SZ6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDK5RAP1Q96SZ6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDK5RAP1Q96SZ6 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDK5RAP1Q96SZ6 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.85■■□□□ 1.89
CDK5RAP1Q96SZ6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.85■■□□□ 1.89
CDK5RAP1Q96SZ6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDK5RAP1Q96SZ6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.83■■□□□ 1.89
CDK5RAP1Q96SZ6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDK5RAP1Q96SZ6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.83■■□□□ 1.89
CDK5RAP1Q96SZ6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
CDK5RAP1Q96SZ6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDK5RAP1Q96SZ6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.83■■□□□ 1.88
CDK5RAP1Q96SZ6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms