Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
HAPLN3Q96S86 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.91■■□□□ 1.9
HAPLN3Q96S86 DUX4L29-201ENST00000425409 679 ntBASIC26.91■■□□□ 1.9
HAPLN3Q96S86 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
HAPLN3Q96S86 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
HAPLN3Q96S86 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
HAPLN3Q96S86 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
HAPLN3Q96S86 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
HAPLN3Q96S86 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
HAPLN3Q96S86 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
HAPLN3Q96S86 AC021231.2-201ENST00000594613 730 ntBASIC26.89■■□□□ 1.9
HAPLN3Q96S86 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
HAPLN3Q96S86 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
HAPLN3Q96S86 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
HAPLN3Q96S86 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
HAPLN3Q96S86 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.87■■□□□ 1.89
HAPLN3Q96S86 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.87■■□□□ 1.89
HAPLN3Q96S86 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
HAPLN3Q96S86 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
HAPLN3Q96S86 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
HAPLN3Q96S86 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
HAPLN3Q96S86 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
HAPLN3Q96S86 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
HAPLN3Q96S86 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.85■■□□□ 1.89
HAPLN3Q96S86 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.85■■□□□ 1.89
HAPLN3Q96S86 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.85■■□□□ 1.89
HAPLN3Q96S86 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
HAPLN3Q96S86 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
HAPLN3Q96S86 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
HAPLN3Q96S86 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.84■■□□□ 1.89
HAPLN3Q96S86 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.84■■□□□ 1.89
HAPLN3Q96S86 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.84■■□□□ 1.89
HAPLN3Q96S86 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.84■■□□□ 1.89
HAPLN3Q96S86 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.84■■□□□ 1.89
HAPLN3Q96S86 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
HAPLN3Q96S86 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
HAPLN3Q96S86 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
HAPLN3Q96S86 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
HAPLN3Q96S86 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
HAPLN3Q96S86 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
HAPLN3Q96S86 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.82■■□□□ 1.88
HAPLN3Q96S86 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
HAPLN3Q96S86 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
HAPLN3Q96S86 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
HAPLN3Q96S86 LINC00273-201ENST00000539813 1452 ntBASIC26.81■■□□□ 1.88
HAPLN3Q96S86 AL139393.2-201ENST00000608721 2025 ntBASIC26.8■■□□□ 1.88
HAPLN3Q96S86 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
HAPLN3Q96S86 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
HAPLN3Q96S86 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
HAPLN3Q96S86 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
HAPLN3Q96S86 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
HAPLN3Q96S86 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
HAPLN3Q96S86 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
HAPLN3Q96S86 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.79■■□□□ 1.88
HAPLN3Q96S86 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
HAPLN3Q96S86 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.78■■□□□ 1.88
HAPLN3Q96S86 AP004833.2-201ENST00000532228 1454 ntBASIC26.78■■□□□ 1.88
HAPLN3Q96S86 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
HAPLN3Q96S86 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.78■■□□□ 1.88
HAPLN3Q96S86 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
HAPLN3Q96S86 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
HAPLN3Q96S86 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
HAPLN3Q96S86 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.76■■□□□ 1.88
HAPLN3Q96S86 ABCB10P3-201ENST00000561950 2166 ntBASIC26.76■■□□□ 1.87
HAPLN3Q96S86 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.76■■□□□ 1.87
HAPLN3Q96S86 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
HAPLN3Q96S86 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
HAPLN3Q96S86 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.76■■□□□ 1.87
HAPLN3Q96S86 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
HAPLN3Q96S86 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
HAPLN3Q96S86 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
HAPLN3Q96S86 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.75■■□□□ 1.87
HAPLN3Q96S86 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
HAPLN3Q96S86 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.74■■□□□ 1.87
HAPLN3Q96S86 ABHD17AP4-201ENST00000411545 909 ntBASIC26.73■■□□□ 1.87
HAPLN3Q96S86 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
HAPLN3Q96S86 AC139426.1-201ENST00000568218 2529 ntBASIC26.73■■□□□ 1.87
HAPLN3Q96S86 AC135983.2-203ENST00000454486 1613 ntBASIC26.72■■□□□ 1.87
HAPLN3Q96S86 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
HAPLN3Q96S86 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.72■■□□□ 1.87
HAPLN3Q96S86 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.7■■□□□ 1.87
HAPLN3Q96S86 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.7■■□□□ 1.87
HAPLN3Q96S86 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.7■■□□□ 1.86
HAPLN3Q96S86 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.7■■□□□ 1.86
HAPLN3Q96S86 ZNRF2P2-203ENST00000454624 420 ntBASIC26.69■■□□□ 1.86
HAPLN3Q96S86 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.69■■□□□ 1.86
HAPLN3Q96S86 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
HAPLN3Q96S86 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.68■■□□□ 1.86
HAPLN3Q96S86 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
HAPLN3Q96S86 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
HAPLN3Q96S86 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
HAPLN3Q96S86 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
HAPLN3Q96S86 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
HAPLN3Q96S86 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.66■■□□□ 1.86
HAPLN3Q96S86 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
HAPLN3Q96S86 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
HAPLN3Q96S86 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
HAPLN3Q96S86 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
HAPLN3Q96S86 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.65■■□□□ 1.86
HAPLN3Q96S86 WHAMMP2-203ENST00000563942 1603 ntBASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms