Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
SNED1Q8TER0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC32.34■■■□□ 2.77
SNED1Q8TER0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC32.34■■■□□ 2.77
SNED1Q8TER0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC32.33■■■□□ 2.77
SNED1Q8TER0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
SNED1Q8TER0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SNED1Q8TER0 RNF126P1-201ENST00000567452 1320 ntBASIC32.32■■■□□ 2.76
SNED1Q8TER0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC32.31■■■□□ 2.76
SNED1Q8TER0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC32.31■■■□□ 2.76
SNED1Q8TER0 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
SNED1Q8TER0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC32.3■■■□□ 2.76
SNED1Q8TER0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
SNED1Q8TER0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC32.28■■■□□ 2.76
SNED1Q8TER0 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
SNED1Q8TER0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32.27■■■□□ 2.76
SNED1Q8TER0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
SNED1Q8TER0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
SNED1Q8TER0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
SNED1Q8TER0 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SNED1Q8TER0 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC32.25■■■□□ 2.75
SNED1Q8TER0 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC32.25■■■□□ 2.75
SNED1Q8TER0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC32.25■■■□□ 2.75
SNED1Q8TER0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SNED1Q8TER0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC32.24■■■□□ 2.75
SNED1Q8TER0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC32.22■■■□□ 2.75
SNED1Q8TER0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC32.22■■■□□ 2.75
SNED1Q8TER0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC32.22■■■□□ 2.75
SNED1Q8TER0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC32.22■■■□□ 2.75
SNED1Q8TER0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC32.22■■■□□ 2.75
SNED1Q8TER0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
SNED1Q8TER0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC32.19■■■□□ 2.74
SNED1Q8TER0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
SNED1Q8TER0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
SNED1Q8TER0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
SNED1Q8TER0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC32.18■■■□□ 2.74
SNED1Q8TER0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC32.17■■■□□ 2.74
SNED1Q8TER0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SNED1Q8TER0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
SNED1Q8TER0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
SNED1Q8TER0 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
SNED1Q8TER0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC32.13■■■□□ 2.73
SNED1Q8TER0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.13■■■□□ 2.73
SNED1Q8TER0 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
SNED1Q8TER0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
SNED1Q8TER0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
SNED1Q8TER0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
SNED1Q8TER0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.12■■■□□ 2.73
SNED1Q8TER0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
SNED1Q8TER0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
SNED1Q8TER0 NTF6A-201ENST00000591175 560 ntBASIC32.11■■■□□ 2.73
SNED1Q8TER0 AL161658.1-201ENST00000623641 1967 ntBASIC32.11■■■□□ 2.73
SNED1Q8TER0 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC32.11■■■□□ 2.73
SNED1Q8TER0 AC010864.1-201ENST00000609407 1511 ntBASIC32.11■■■□□ 2.73
SNED1Q8TER0 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
SNED1Q8TER0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC32.1■■■□□ 2.73
SNED1Q8TER0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC32.09■■■□□ 2.73
SNED1Q8TER0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
SNED1Q8TER0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC32.09■■■□□ 2.73
SNED1Q8TER0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
SNED1Q8TER0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC32.08■■■□□ 2.73
SNED1Q8TER0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
SNED1Q8TER0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
SNED1Q8TER0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC32.08■■■□□ 2.73
SNED1Q8TER0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SNED1Q8TER0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
SNED1Q8TER0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
SNED1Q8TER0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
SNED1Q8TER0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
SNED1Q8TER0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC32.06■■■□□ 2.72
SNED1Q8TER0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
SNED1Q8TER0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC32.05■■■□□ 2.72
SNED1Q8TER0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
SNED1Q8TER0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
SNED1Q8TER0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
SNED1Q8TER0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
SNED1Q8TER0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
SNED1Q8TER0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC32.01■■■□□ 2.72
SNED1Q8TER0 AC012354.3-201ENST00000623734 483 ntBASIC32.01■■■□□ 2.72
SNED1Q8TER0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC32.01■■■□□ 2.72
SNED1Q8TER0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC32■■■□□ 2.71
SNED1Q8TER0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
SNED1Q8TER0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.99■■■□□ 2.71
SNED1Q8TER0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.99■■■□□ 2.71
SNED1Q8TER0 AC022413.1-201ENST00000624602 984 ntBASIC31.99■■■□□ 2.71
SNED1Q8TER0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SNED1Q8TER0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.99■■■□□ 2.71
SNED1Q8TER0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
SNED1Q8TER0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SNED1Q8TER0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SNED1Q8TER0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.98■■■□□ 2.71
SNED1Q8TER0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.98■■■□□ 2.71
SNED1Q8TER0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
SNED1Q8TER0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.97■■■□□ 2.71
SNED1Q8TER0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
SNED1Q8TER0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
SNED1Q8TER0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SNED1Q8TER0 AC008813.1-201ENST00000536597 885 ntBASIC31.93■■■□□ 2.7
SNED1Q8TER0 AC135983.2-203ENST00000454486 1613 ntBASIC31.92■■■□□ 2.7
SNED1Q8TER0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
SNED1Q8TER0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms