Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
SSH3Q8TE77 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32.35■■■□□ 2.77
SSH3Q8TE77 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC32.35■■■□□ 2.77
SSH3Q8TE77 AC021231.2-201ENST00000594613 730 ntBASIC32.35■■■□□ 2.77
SSH3Q8TE77 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
SSH3Q8TE77 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
SSH3Q8TE77 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC32.33■■■□□ 2.77
SSH3Q8TE77 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
SSH3Q8TE77 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC32.31■■■□□ 2.76
SSH3Q8TE77 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
SSH3Q8TE77 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC32.31■■■□□ 2.76
SSH3Q8TE77 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
SSH3Q8TE77 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SSH3Q8TE77 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
SSH3Q8TE77 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
SSH3Q8TE77 DUX4L29-201ENST00000425409 679 ntBASIC32.3■■■□□ 2.76
SSH3Q8TE77 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC32.3■■■□□ 2.76
SSH3Q8TE77 AL139393.2-201ENST00000608721 2025 ntBASIC32.29■■■□□ 2.76
SSH3Q8TE77 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
SSH3Q8TE77 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.29■■■□□ 2.76
SSH3Q8TE77 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
SSH3Q8TE77 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.29■■■□□ 2.76
SSH3Q8TE77 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
SSH3Q8TE77 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC32.29■■■□□ 2.76
SSH3Q8TE77 HGH1-207ENST00000628266 258 ntTSL 5 BASIC32.29■■■□□ 2.76
SSH3Q8TE77 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SSH3Q8TE77 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC32.28■■■□□ 2.76
SSH3Q8TE77 ABCB10P3-201ENST00000561950 2166 ntBASIC32.28■■■□□ 2.76
SSH3Q8TE77 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
SSH3Q8TE77 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SSH3Q8TE77 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.76
SSH3Q8TE77 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32.26■■■□□ 2.75
SSH3Q8TE77 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
SSH3Q8TE77 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC32.26■■■□□ 2.75
SSH3Q8TE77 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
SSH3Q8TE77 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
SSH3Q8TE77 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC32.25■■■□□ 2.75
SSH3Q8TE77 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SSH3Q8TE77 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SSH3Q8TE77 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.24■■■□□ 2.75
SSH3Q8TE77 LINC00273-201ENST00000539813 1452 ntBASIC32.23■■■□□ 2.75
SSH3Q8TE77 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SSH3Q8TE77 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.23■■■□□ 2.75
SSH3Q8TE77 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.23■■■□□ 2.75
SSH3Q8TE77 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.23■■■□□ 2.75
SSH3Q8TE77 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
SSH3Q8TE77 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
SSH3Q8TE77 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC32.22■■■□□ 2.75
SSH3Q8TE77 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.22■■■□□ 2.75
SSH3Q8TE77 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
SSH3Q8TE77 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
SSH3Q8TE77 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
SSH3Q8TE77 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
SSH3Q8TE77 CALM3-209ENST00000597743 577 ntTSL 4 BASIC32.2■■■□□ 2.75
SSH3Q8TE77 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.2■■■□□ 2.74
SSH3Q8TE77 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
SSH3Q8TE77 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC32.19■■■□□ 2.74
SSH3Q8TE77 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.74
SSH3Q8TE77 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC32.19■■■□□ 2.74
SSH3Q8TE77 AC139426.1-201ENST00000568218 2529 ntBASIC32.18■■■□□ 2.74
SSH3Q8TE77 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
SSH3Q8TE77 AC135983.2-203ENST00000454486 1613 ntBASIC32.17■■■□□ 2.74
SSH3Q8TE77 AP004833.2-201ENST00000532228 1454 ntBASIC32.16■■■□□ 2.74
SSH3Q8TE77 ABHD17AP4-201ENST00000411545 909 ntBASIC32.14■■■□□ 2.74
SSH3Q8TE77 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
SSH3Q8TE77 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
SSH3Q8TE77 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
SSH3Q8TE77 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC32.13■■■□□ 2.73
SSH3Q8TE77 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC32.13■■■□□ 2.73
SSH3Q8TE77 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.13■■■□□ 2.73
SSH3Q8TE77 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.13■■■□□ 2.73
SSH3Q8TE77 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC32.13■■■□□ 2.73
SSH3Q8TE77 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
SSH3Q8TE77 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC32.12■■■□□ 2.73
SSH3Q8TE77 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
SSH3Q8TE77 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
SSH3Q8TE77 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC32.11■■■□□ 2.73
SSH3Q8TE77 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC32.11■■■□□ 2.73
SSH3Q8TE77 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC32.11■■■□□ 2.73
SSH3Q8TE77 WHAMMP2-203ENST00000563942 1603 ntBASIC32.11■■■□□ 2.73
SSH3Q8TE77 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
SSH3Q8TE77 ZNRF2P2-203ENST00000454624 420 ntBASIC32.09■■■□□ 2.73
SSH3Q8TE77 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
SSH3Q8TE77 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC32.09■■■□□ 2.73
SSH3Q8TE77 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC32.09■■■□□ 2.73
SSH3Q8TE77 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC32.09■■■□□ 2.73
SSH3Q8TE77 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC32.08■■■□□ 2.73
SSH3Q8TE77 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SSH3Q8TE77 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC32.08■■■□□ 2.73
SSH3Q8TE77 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.73
SSH3Q8TE77 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC32.07■■■□□ 2.73
SSH3Q8TE77 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
SSH3Q8TE77 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
SSH3Q8TE77 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
SSH3Q8TE77 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC32.06■■■□□ 2.72
SSH3Q8TE77 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
SSH3Q8TE77 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC32.05■■■□□ 2.72
SSH3Q8TE77 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC32.05■■■□□ 2.72
SSH3Q8TE77 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC32.05■■■□□ 2.72
SSH3Q8TE77 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC32.05■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms