Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SLC44A5Q8NCS7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SLC44A5Q8NCS7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
SLC44A5Q8NCS7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SLC44A5Q8NCS7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.85■■■□□ 2.53
SLC44A5Q8NCS7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SLC44A5Q8NCS7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SLC44A5Q8NCS7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SLC44A5Q8NCS7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.83■■■□□ 2.53
SLC44A5Q8NCS7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.83■■■□□ 2.53
SLC44A5Q8NCS7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
SLC44A5Q8NCS7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
SLC44A5Q8NCS7 MIR639-201ENST00000384974 98 ntBASIC30.82■■■□□ 2.52
SLC44A5Q8NCS7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
SLC44A5Q8NCS7 LINC00273-201ENST00000539813 1452 ntBASIC30.82■■■□□ 2.52
SLC44A5Q8NCS7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.82■■■□□ 2.52
SLC44A5Q8NCS7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.81■■■□□ 2.52
SLC44A5Q8NCS7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SLC44A5Q8NCS7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SLC44A5Q8NCS7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.8■■■□□ 2.52
SLC44A5Q8NCS7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.8■■■□□ 2.52
SLC44A5Q8NCS7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.8■■■□□ 2.52
SLC44A5Q8NCS7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SLC44A5Q8NCS7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.79■■■□□ 2.52
SLC44A5Q8NCS7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
SLC44A5Q8NCS7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SLC44A5Q8NCS7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.78■■■□□ 2.52
SLC44A5Q8NCS7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
SLC44A5Q8NCS7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.77■■■□□ 2.52
SLC44A5Q8NCS7 DUX4L13-201ENST00000554103 1267 ntBASIC30.77■■■□□ 2.52
SLC44A5Q8NCS7 DUX4L15-201ENST00000611059 1267 ntBASIC30.77■■■□□ 2.52
SLC44A5Q8NCS7 DUX4L23-201ENST00000615195 1269 ntBASIC30.77■■■□□ 2.52
SLC44A5Q8NCS7 DUX4L24-201ENST00000617576 1269 ntBASIC30.77■■■□□ 2.52
SLC44A5Q8NCS7 DUX4L22-201ENST00000618238 1269 ntBASIC30.77■■■□□ 2.52
SLC44A5Q8NCS7 DUX4L20-201ENST00000619712 1269 ntBASIC30.77■■■□□ 2.52
SLC44A5Q8NCS7 DUX4L21-201ENST00000622058 1269 ntBASIC30.77■■■□□ 2.52
SLC44A5Q8NCS7 DUX4L10-201ENST00000622460 1267 ntBASIC30.77■■■□□ 2.52
SLC44A5Q8NCS7 DUX4L25-201ENST00000624915 1269 ntBASIC30.77■■■□□ 2.52
SLC44A5Q8NCS7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
SLC44A5Q8NCS7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.76■■■□□ 2.51
SLC44A5Q8NCS7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
SLC44A5Q8NCS7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SLC44A5Q8NCS7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
SLC44A5Q8NCS7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SLC44A5Q8NCS7 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.75■■■□□ 2.51
SLC44A5Q8NCS7 MIR4449-201ENST00000578365 66 ntBASIC30.74■■■□□ 2.51
SLC44A5Q8NCS7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
SLC44A5Q8NCS7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.72■■■□□ 2.51
SLC44A5Q8NCS7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SLC44A5Q8NCS7 ST7-AS1-201ENST00000456775 1889 ntBASIC30.71■■■□□ 2.51
SLC44A5Q8NCS7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
SLC44A5Q8NCS7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.7■■■□□ 2.51
SLC44A5Q8NCS7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
SLC44A5Q8NCS7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
SLC44A5Q8NCS7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.69■■■□□ 2.5
SLC44A5Q8NCS7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SLC44A5Q8NCS7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
SLC44A5Q8NCS7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SLC44A5Q8NCS7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SLC44A5Q8NCS7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SLC44A5Q8NCS7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.67■■■□□ 2.5
SLC44A5Q8NCS7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SLC44A5Q8NCS7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
SLC44A5Q8NCS7 WHAMMP2-203ENST00000563942 1603 ntBASIC30.66■■■□□ 2.5
SLC44A5Q8NCS7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SLC44A5Q8NCS7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.66■■■□□ 2.5
SLC44A5Q8NCS7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.66■■■□□ 2.5
SLC44A5Q8NCS7 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.66■■■□□ 2.5
SLC44A5Q8NCS7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
SLC44A5Q8NCS7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SLC44A5Q8NCS7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.65■■■□□ 2.5
SLC44A5Q8NCS7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
SLC44A5Q8NCS7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.64■■■□□ 2.5
SLC44A5Q8NCS7 AC135983.2-203ENST00000454486 1613 ntBASIC30.64■■■□□ 2.5
SLC44A5Q8NCS7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SLC44A5Q8NCS7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.64■■■□□ 2.49
SLC44A5Q8NCS7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
SLC44A5Q8NCS7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SLC44A5Q8NCS7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.62■■■□□ 2.49
SLC44A5Q8NCS7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.62■■■□□ 2.49
SLC44A5Q8NCS7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SLC44A5Q8NCS7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.61■■■□□ 2.49
SLC44A5Q8NCS7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SLC44A5Q8NCS7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SLC44A5Q8NCS7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SLC44A5Q8NCS7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
SLC44A5Q8NCS7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SLC44A5Q8NCS7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
SLC44A5Q8NCS7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
SLC44A5Q8NCS7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
SLC44A5Q8NCS7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SLC44A5Q8NCS7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.56■■■□□ 2.48
SLC44A5Q8NCS7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
SLC44A5Q8NCS7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SLC44A5Q8NCS7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SLC44A5Q8NCS7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SLC44A5Q8NCS7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SLC44A5Q8NCS7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SLC44A5Q8NCS7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
SLC44A5Q8NCS7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms