Protein–RNA interactions for Protein: Q8NC42

RNF149, E3 ubiquitin-protein ligase RNF149, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149Q8NC42 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.67■■■□□ 2.18
RNF149Q8NC42 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
RNF149Q8NC42 LINC00273-201ENST00000539813 1452 ntBASIC28.66■■■□□ 2.18
RNF149Q8NC42 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.66■■■□□ 2.18
RNF149Q8NC42 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.66■■■□□ 2.18
RNF149Q8NC42 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.66■■■□□ 2.18
RNF149Q8NC42 ST7-AS1-201ENST00000456775 1889 ntBASIC28.66■■■□□ 2.18
RNF149Q8NC42 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.65■■■□□ 2.18
RNF149Q8NC42 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.65■■■□□ 2.18
RNF149Q8NC42 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.64■■■□□ 2.18
RNF149Q8NC42 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.64■■■□□ 2.18
RNF149Q8NC42 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.64■■■□□ 2.18
RNF149Q8NC42 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.64■■■□□ 2.18
RNF149Q8NC42 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
RNF149Q8NC42 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
RNF149Q8NC42 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
RNF149Q8NC42 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RNF149Q8NC42 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.63■■■□□ 2.17
RNF149Q8NC42 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RNF149Q8NC42 MIR3648-2-201ENST00000581792 180 ntBASIC28.62■■■□□ 2.17
RNF149Q8NC42 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.62■■■□□ 2.17
RNF149Q8NC42 MIR3648-1-201ENST00000615959 180 ntBASIC28.62■■■□□ 2.17
RNF149Q8NC42 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
RNF149Q8NC42 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
RNF149Q8NC42 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.61■■■□□ 2.17
RNF149Q8NC42 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
RNF149Q8NC42 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.6■■■□□ 2.17
RNF149Q8NC42 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
RNF149Q8NC42 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.6■■■□□ 2.17
RNF149Q8NC42 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.59■■■□□ 2.17
RNF149Q8NC42 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.59■■■□□ 2.17
RNF149Q8NC42 CR559946.2-201ENST00000623684 991 ntBASIC28.59■■■□□ 2.17
RNF149Q8NC42 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
RNF149Q8NC42 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.58■■■□□ 2.17
RNF149Q8NC42 AC016575.1-201ENST00000607026 382 ntBASIC28.58■■■□□ 2.17
RNF149Q8NC42 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.58■■■□□ 2.17
RNF149Q8NC42 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.58■■■□□ 2.17
RNF149Q8NC42 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
RNF149Q8NC42 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.56■■■□□ 2.16
RNF149Q8NC42 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
RNF149Q8NC42 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
RNF149Q8NC42 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
RNF149Q8NC42 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.55■■■□□ 2.16
RNF149Q8NC42 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.55■■■□□ 2.16
RNF149Q8NC42 DUX4L13-201ENST00000554103 1267 ntBASIC28.55■■■□□ 2.16
RNF149Q8NC42 DUX4L15-201ENST00000611059 1267 ntBASIC28.55■■■□□ 2.16
RNF149Q8NC42 DUX4L23-201ENST00000615195 1269 ntBASIC28.55■■■□□ 2.16
RNF149Q8NC42 DUX4L24-201ENST00000617576 1269 ntBASIC28.55■■■□□ 2.16
RNF149Q8NC42 DUX4L22-201ENST00000618238 1269 ntBASIC28.55■■■□□ 2.16
RNF149Q8NC42 DUX4L20-201ENST00000619712 1269 ntBASIC28.55■■■□□ 2.16
RNF149Q8NC42 DUX4L21-201ENST00000622058 1269 ntBASIC28.55■■■□□ 2.16
RNF149Q8NC42 DUX4L10-201ENST00000622460 1267 ntBASIC28.55■■■□□ 2.16
RNF149Q8NC42 DUX4L25-201ENST00000624915 1269 ntBASIC28.55■■■□□ 2.16
RNF149Q8NC42 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
RNF149Q8NC42 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.55■■■□□ 2.16
RNF149Q8NC42 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.55■■■□□ 2.16
RNF149Q8NC42 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
RNF149Q8NC42 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
RNF149Q8NC42 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RNF149Q8NC42 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
RNF149Q8NC42 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
RNF149Q8NC42 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RNF149Q8NC42 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNF149Q8NC42 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNF149Q8NC42 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNF149Q8NC42 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.53■■■□□ 2.16
RNF149Q8NC42 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
RNF149Q8NC42 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RNF149Q8NC42 MIR639-201ENST00000384974 98 ntBASIC28.51■■■□□ 2.15
RNF149Q8NC42 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.5■■■□□ 2.15
RNF149Q8NC42 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.5■■■□□ 2.15
RNF149Q8NC42 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
RNF149Q8NC42 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.5■■■□□ 2.15
RNF149Q8NC42 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
RNF149Q8NC42 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
RNF149Q8NC42 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
RNF149Q8NC42 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.49■■■□□ 2.15
RNF149Q8NC42 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.49■■■□□ 2.15
RNF149Q8NC42 AC135983.2-203ENST00000454486 1613 ntBASIC28.49■■■□□ 2.15
RNF149Q8NC42 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
RNF149Q8NC42 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RNF149Q8NC42 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RNF149Q8NC42 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RNF149Q8NC42 WHAMMP2-203ENST00000563942 1603 ntBASIC28.47■■■□□ 2.15
RNF149Q8NC42 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RNF149Q8NC42 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
RNF149Q8NC42 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
RNF149Q8NC42 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.44■■■□□ 2.14
RNF149Q8NC42 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
RNF149Q8NC42 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
RNF149Q8NC42 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
RNF149Q8NC42 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
RNF149Q8NC42 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
RNF149Q8NC42 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
RNF149Q8NC42 MIR4449-201ENST00000578365 66 ntBASIC28.41■■■□□ 2.14
RNF149Q8NC42 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
RNF149Q8NC42 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
RNF149Q8NC42 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
RNF149Q8NC42 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
RNF149Q8NC42 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms