Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
LSMEM1Q8N8F7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
LSMEM1Q8N8F7 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.71■■□□□ 1.39
LSMEM1Q8N8F7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LSMEM1Q8N8F7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
LSMEM1Q8N8F7 AP004833.2-201ENST00000532228 1454 ntBASIC23.7■■□□□ 1.38
LSMEM1Q8N8F7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
LSMEM1Q8N8F7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.68■■□□□ 1.38
LSMEM1Q8N8F7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LSMEM1Q8N8F7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
LSMEM1Q8N8F7 AC127502.1-201ENST00000399971 1502 ntBASIC23.68■■□□□ 1.38
LSMEM1Q8N8F7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LSMEM1Q8N8F7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LSMEM1Q8N8F7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LSMEM1Q8N8F7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.67■■□□□ 1.38
LSMEM1Q8N8F7 AC005559.1-201ENST00000589661 871 ntBASIC23.67■■□□□ 1.38
LSMEM1Q8N8F7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LSMEM1Q8N8F7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.65■■□□□ 1.38
LSMEM1Q8N8F7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LSMEM1Q8N8F7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
LSMEM1Q8N8F7 AC142086.6-201ENST00000621154 1765 ntBASIC23.65■■□□□ 1.38
LSMEM1Q8N8F7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
LSMEM1Q8N8F7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
LSMEM1Q8N8F7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.64■■□□□ 1.38
LSMEM1Q8N8F7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LSMEM1Q8N8F7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.64■■□□□ 1.37
LSMEM1Q8N8F7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.63■■□□□ 1.37
LSMEM1Q8N8F7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LSMEM1Q8N8F7 DRD5P2-201ENST00000421395 2012 ntBASIC23.62■■□□□ 1.37
LSMEM1Q8N8F7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LSMEM1Q8N8F7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.62■■□□□ 1.37
LSMEM1Q8N8F7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.62■■□□□ 1.37
LSMEM1Q8N8F7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
LSMEM1Q8N8F7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.61■■□□□ 1.37
LSMEM1Q8N8F7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LSMEM1Q8N8F7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.61■■□□□ 1.37
LSMEM1Q8N8F7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.61■■□□□ 1.37
LSMEM1Q8N8F7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LSMEM1Q8N8F7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
LSMEM1Q8N8F7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.6■■□□□ 1.37
LSMEM1Q8N8F7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
LSMEM1Q8N8F7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
LSMEM1Q8N8F7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
LSMEM1Q8N8F7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
LSMEM1Q8N8F7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.59■■□□□ 1.37
LSMEM1Q8N8F7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
LSMEM1Q8N8F7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.58■■□□□ 1.37
LSMEM1Q8N8F7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.58■■□□□ 1.37
LSMEM1Q8N8F7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LSMEM1Q8N8F7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.57■■□□□ 1.36
LSMEM1Q8N8F7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LSMEM1Q8N8F7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LSMEM1Q8N8F7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LSMEM1Q8N8F7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
LSMEM1Q8N8F7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LSMEM1Q8N8F7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.56■■□□□ 1.36
LSMEM1Q8N8F7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.56■■□□□ 1.36
LSMEM1Q8N8F7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
LSMEM1Q8N8F7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LSMEM1Q8N8F7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LSMEM1Q8N8F7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
LSMEM1Q8N8F7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LSMEM1Q8N8F7 DUX4L28-201ENST00000623687 678 ntBASIC23.55■■□□□ 1.36
LSMEM1Q8N8F7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.54■■□□□ 1.36
LSMEM1Q8N8F7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
LSMEM1Q8N8F7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.54■■□□□ 1.36
LSMEM1Q8N8F7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
LSMEM1Q8N8F7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.54■■□□□ 1.36
LSMEM1Q8N8F7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.54■■□□□ 1.36
LSMEM1Q8N8F7 MIR3665-201ENST00000578708 105 ntBASIC23.54■■□□□ 1.36
LSMEM1Q8N8F7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
LSMEM1Q8N8F7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.52■■□□□ 1.36
LSMEM1Q8N8F7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.52■■□□□ 1.36
LSMEM1Q8N8F7 AC108673.1-201ENST00000510422 1159 ntBASIC23.52■■□□□ 1.36
LSMEM1Q8N8F7 AP006261.1-201ENST00000584783 668 ntBASIC23.52■■□□□ 1.36
LSMEM1Q8N8F7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LSMEM1Q8N8F7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LSMEM1Q8N8F7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LSMEM1Q8N8F7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LSMEM1Q8N8F7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.51■■□□□ 1.35
LSMEM1Q8N8F7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LSMEM1Q8N8F7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
LSMEM1Q8N8F7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LSMEM1Q8N8F7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LSMEM1Q8N8F7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LSMEM1Q8N8F7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LSMEM1Q8N8F7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LSMEM1Q8N8F7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
LSMEM1Q8N8F7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LSMEM1Q8N8F7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
LSMEM1Q8N8F7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LSMEM1Q8N8F7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
LSMEM1Q8N8F7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.49■■□□□ 1.35
LSMEM1Q8N8F7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
LSMEM1Q8N8F7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
LSMEM1Q8N8F7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.48■■□□□ 1.35
LSMEM1Q8N8F7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
LSMEM1Q8N8F7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LSMEM1Q8N8F7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LSMEM1Q8N8F7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms