Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.41■■□□□ 1.66
EFCAB3Q8N7B9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
EFCAB3Q8N7B9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
EFCAB3Q8N7B9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.4■■□□□ 1.66
EFCAB3Q8N7B9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
EFCAB3Q8N7B9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
EFCAB3Q8N7B9 AC044849.2-201ENST00000606596 710 ntBASIC25.4■■□□□ 1.66
EFCAB3Q8N7B9 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
EFCAB3Q8N7B9 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
EFCAB3Q8N7B9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
EFCAB3Q8N7B9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
EFCAB3Q8N7B9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
EFCAB3Q8N7B9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.4■■□□□ 1.66
EFCAB3Q8N7B9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
EFCAB3Q8N7B9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
EFCAB3Q8N7B9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
EFCAB3Q8N7B9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
EFCAB3Q8N7B9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
EFCAB3Q8N7B9 AC087741.3-201ENST00000624270 1347 ntBASIC25.37■■□□□ 1.65
EFCAB3Q8N7B9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.37■■□□□ 1.65
EFCAB3Q8N7B9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
EFCAB3Q8N7B9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.37■■□□□ 1.65
EFCAB3Q8N7B9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.37■■□□□ 1.65
EFCAB3Q8N7B9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
EFCAB3Q8N7B9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.35■■□□□ 1.65
EFCAB3Q8N7B9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
EFCAB3Q8N7B9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
EFCAB3Q8N7B9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
EFCAB3Q8N7B9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
EFCAB3Q8N7B9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.33■■□□□ 1.65
EFCAB3Q8N7B9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
EFCAB3Q8N7B9 DUX4L28-201ENST00000623687 678 ntBASIC25.31■■□□□ 1.64
EFCAB3Q8N7B9 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.31■■□□□ 1.64
EFCAB3Q8N7B9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.3■■□□□ 1.64
EFCAB3Q8N7B9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
EFCAB3Q8N7B9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
EFCAB3Q8N7B9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
EFCAB3Q8N7B9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
EFCAB3Q8N7B9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
EFCAB3Q8N7B9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
EFCAB3Q8N7B9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
EFCAB3Q8N7B9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
EFCAB3Q8N7B9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
EFCAB3Q8N7B9 AC005559.1-201ENST00000589661 871 ntBASIC25.27■■□□□ 1.64
EFCAB3Q8N7B9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
EFCAB3Q8N7B9 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
EFCAB3Q8N7B9 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
EFCAB3Q8N7B9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.26■■□□□ 1.63
EFCAB3Q8N7B9 DRD5P2-201ENST00000421395 2012 ntBASIC25.25■■□□□ 1.63
EFCAB3Q8N7B9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
EFCAB3Q8N7B9 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
EFCAB3Q8N7B9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
EFCAB3Q8N7B9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.25■■□□□ 1.63
EFCAB3Q8N7B9 MIR762-201ENST00000390236 83 ntBASIC25.25■■□□□ 1.63
EFCAB3Q8N7B9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.25■■□□□ 1.63
EFCAB3Q8N7B9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.25■■□□□ 1.63
EFCAB3Q8N7B9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
EFCAB3Q8N7B9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
EFCAB3Q8N7B9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
EFCAB3Q8N7B9 AL121749.1-202ENST00000609313 2153 ntBASIC25.24■■□□□ 1.63
EFCAB3Q8N7B9 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
EFCAB3Q8N7B9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
EFCAB3Q8N7B9 AL139393.2-201ENST00000608721 2025 ntBASIC25.23■■□□□ 1.63
EFCAB3Q8N7B9 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.23■■□□□ 1.63
EFCAB3Q8N7B9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.22■■□□□ 1.63
EFCAB3Q8N7B9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
EFCAB3Q8N7B9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
EFCAB3Q8N7B9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
EFCAB3Q8N7B9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
EFCAB3Q8N7B9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
EFCAB3Q8N7B9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
EFCAB3Q8N7B9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
EFCAB3Q8N7B9 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
EFCAB3Q8N7B9 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
EFCAB3Q8N7B9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
EFCAB3Q8N7B9 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.63
EFCAB3Q8N7B9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
EFCAB3Q8N7B9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
EFCAB3Q8N7B9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.2■■□□□ 1.62
EFCAB3Q8N7B9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.2■■□□□ 1.62
EFCAB3Q8N7B9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
EFCAB3Q8N7B9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
EFCAB3Q8N7B9 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
EFCAB3Q8N7B9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
EFCAB3Q8N7B9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.19■■□□□ 1.62
EFCAB3Q8N7B9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
EFCAB3Q8N7B9 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
EFCAB3Q8N7B9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
EFCAB3Q8N7B9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
EFCAB3Q8N7B9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
EFCAB3Q8N7B9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
EFCAB3Q8N7B9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
EFCAB3Q8N7B9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.16■■□□□ 1.62
EFCAB3Q8N7B9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.16■■□□□ 1.62
EFCAB3Q8N7B9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
EFCAB3Q8N7B9 AC135731.1-201ENST00000569415 2548 ntBASIC25.15■■□□□ 1.62
EFCAB3Q8N7B9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
EFCAB3Q8N7B9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
EFCAB3Q8N7B9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
EFCAB3Q8N7B9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms