Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TTC9BQ8N6N2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC27.56■■■□□ 2
TTC9BQ8N6N2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TTC9BQ8N6N2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.55■■■□□ 2
TTC9BQ8N6N2 AC127502.1-201ENST00000399971 1502 ntBASIC27.54■■■□□ 2
TTC9BQ8N6N2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.54■■■□□ 2
TTC9BQ8N6N2 DUX4L13-201ENST00000554103 1267 ntBASIC27.54■■■□□ 2
TTC9BQ8N6N2 DUX4L15-201ENST00000611059 1267 ntBASIC27.54■■■□□ 2
TTC9BQ8N6N2 DUX4L23-201ENST00000615195 1269 ntBASIC27.54■■■□□ 2
TTC9BQ8N6N2 DUX4L24-201ENST00000617576 1269 ntBASIC27.54■■■□□ 2
TTC9BQ8N6N2 DUX4L22-201ENST00000618238 1269 ntBASIC27.54■■■□□ 2
TTC9BQ8N6N2 DUX4L20-201ENST00000619712 1269 ntBASIC27.54■■■□□ 2
TTC9BQ8N6N2 DUX4L21-201ENST00000622058 1269 ntBASIC27.54■■■□□ 2
TTC9BQ8N6N2 DUX4L10-201ENST00000622460 1267 ntBASIC27.54■■■□□ 2
TTC9BQ8N6N2 DUX4L25-201ENST00000624915 1269 ntBASIC27.54■■■□□ 2
TTC9BQ8N6N2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
TTC9BQ8N6N2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.53■■■□□ 2
TTC9BQ8N6N2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
TTC9BQ8N6N2 LINC00273-201ENST00000539813 1452 ntBASIC27.53■■■□□ 2
TTC9BQ8N6N2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.53■■■□□ 2
TTC9BQ8N6N2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.52■■■□□ 2
TTC9BQ8N6N2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.52■■■□□ 2
TTC9BQ8N6N2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
TTC9BQ8N6N2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TTC9BQ8N6N2 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.51■■□□□ 1.99
TTC9BQ8N6N2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
TTC9BQ8N6N2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
TTC9BQ8N6N2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
TTC9BQ8N6N2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
TTC9BQ8N6N2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TTC9BQ8N6N2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TTC9BQ8N6N2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.48■■□□□ 1.99
TTC9BQ8N6N2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.48■■□□□ 1.99
TTC9BQ8N6N2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.46■■□□□ 1.99
TTC9BQ8N6N2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TTC9BQ8N6N2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
TTC9BQ8N6N2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
TTC9BQ8N6N2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TTC9BQ8N6N2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TTC9BQ8N6N2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
TTC9BQ8N6N2 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.44■■□□□ 1.98
TTC9BQ8N6N2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.44■■□□□ 1.98
TTC9BQ8N6N2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
TTC9BQ8N6N2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
TTC9BQ8N6N2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.42■■□□□ 1.98
TTC9BQ8N6N2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TTC9BQ8N6N2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.42■■□□□ 1.98
TTC9BQ8N6N2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TTC9BQ8N6N2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.41■■□□□ 1.98
TTC9BQ8N6N2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.41■■□□□ 1.98
TTC9BQ8N6N2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.41■■□□□ 1.98
TTC9BQ8N6N2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
TTC9BQ8N6N2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
TTC9BQ8N6N2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TTC9BQ8N6N2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
TTC9BQ8N6N2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
TTC9BQ8N6N2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TTC9BQ8N6N2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
TTC9BQ8N6N2 WHAMMP2-203ENST00000563942 1603 ntBASIC27.38■■□□□ 1.97
TTC9BQ8N6N2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
TTC9BQ8N6N2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
TTC9BQ8N6N2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.37■■□□□ 1.97
TTC9BQ8N6N2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
TTC9BQ8N6N2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
TTC9BQ8N6N2 AC135983.2-203ENST00000454486 1613 ntBASIC27.36■■□□□ 1.97
TTC9BQ8N6N2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TTC9BQ8N6N2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
TTC9BQ8N6N2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
TTC9BQ8N6N2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
TTC9BQ8N6N2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
TTC9BQ8N6N2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
TTC9BQ8N6N2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TTC9BQ8N6N2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.34■■□□□ 1.97
TTC9BQ8N6N2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TTC9BQ8N6N2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
TTC9BQ8N6N2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.33■■□□□ 1.97
TTC9BQ8N6N2 ST7-AS1-201ENST00000456775 1889 ntBASIC27.33■■□□□ 1.97
TTC9BQ8N6N2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.96
TTC9BQ8N6N2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.96
TTC9BQ8N6N2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC27.32■■□□□ 1.96
TTC9BQ8N6N2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TTC9BQ8N6N2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC27.3■■□□□ 1.96
TTC9BQ8N6N2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.3■■□□□ 1.96
TTC9BQ8N6N2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TTC9BQ8N6N2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TTC9BQ8N6N2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.29■■□□□ 1.96
TTC9BQ8N6N2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TTC9BQ8N6N2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TTC9BQ8N6N2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TTC9BQ8N6N2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TTC9BQ8N6N2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.28■■□□□ 1.96
TTC9BQ8N6N2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TTC9BQ8N6N2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TTC9BQ8N6N2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
TTC9BQ8N6N2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.26■■□□□ 1.95
TTC9BQ8N6N2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TTC9BQ8N6N2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
TTC9BQ8N6N2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
TTC9BQ8N6N2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.25■■□□□ 1.95
TTC9BQ8N6N2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms