Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
CPSF7Q8N684 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CPSF7Q8N684 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CPSF7Q8N684 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
CPSF7Q8N684 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CPSF7Q8N684 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CPSF7Q8N684 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
CPSF7Q8N684 WASH5P-204ENST00000632292 975 ntBASIC25.23■■□□□ 1.63
CPSF7Q8N684 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CPSF7Q8N684 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
CPSF7Q8N684 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CPSF7Q8N684 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.22■■□□□ 1.63
CPSF7Q8N684 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CPSF7Q8N684 RPS2P35-201ENST00000443417 897 ntBASIC25.22■■□□□ 1.63
CPSF7Q8N684 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CPSF7Q8N684 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CPSF7Q8N684 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CPSF7Q8N684 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CPSF7Q8N684 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CPSF7Q8N684 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CPSF7Q8N684 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
CPSF7Q8N684 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.19■■□□□ 1.62
CPSF7Q8N684 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CPSF7Q8N684 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.18■■□□□ 1.62
CPSF7Q8N684 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
CPSF7Q8N684 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CPSF7Q8N684 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.17■■□□□ 1.62
CPSF7Q8N684 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CPSF7Q8N684 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
CPSF7Q8N684 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CPSF7Q8N684 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CPSF7Q8N684 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CPSF7Q8N684 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.15■■□□□ 1.62
CPSF7Q8N684 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CPSF7Q8N684 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.15■■□□□ 1.62
CPSF7Q8N684 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CPSF7Q8N684 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CPSF7Q8N684 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.14■■□□□ 1.62
CPSF7Q8N684 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CPSF7Q8N684 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
CPSF7Q8N684 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CPSF7Q8N684 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.13■■□□□ 1.61
CPSF7Q8N684 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
CPSF7Q8N684 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.13■■□□□ 1.61
CPSF7Q8N684 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CPSF7Q8N684 AC010864.1-201ENST00000609407 1511 ntBASIC25.12■■□□□ 1.61
CPSF7Q8N684 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CPSF7Q8N684 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPSF7Q8N684 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CPSF7Q8N684 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CPSF7Q8N684 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
CPSF7Q8N684 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CPSF7Q8N684 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CPSF7Q8N684 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.09■■□□□ 1.61
CPSF7Q8N684 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CPSF7Q8N684 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.08■■□□□ 1.61
CPSF7Q8N684 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.6
CPSF7Q8N684 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CPSF7Q8N684 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.07■■□□□ 1.6
CPSF7Q8N684 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CPSF7Q8N684 AL162393.1-201ENST00000437852 946 ntBASIC25.07■■□□□ 1.6
CPSF7Q8N684 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.07■■□□□ 1.6
CPSF7Q8N684 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CPSF7Q8N684 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CPSF7Q8N684 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CPSF7Q8N684 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CPSF7Q8N684 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CPSF7Q8N684 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CPSF7Q8N684 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CPSF7Q8N684 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CPSF7Q8N684 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.05■■□□□ 1.6
CPSF7Q8N684 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CPSF7Q8N684 BX255925.1-201ENST00000566954 1854 ntBASIC25.04■■□□□ 1.6
CPSF7Q8N684 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.04■■□□□ 1.6
CPSF7Q8N684 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CPSF7Q8N684 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.04■■□□□ 1.6
CPSF7Q8N684 AP006261.1-201ENST00000584783 668 ntBASIC25.04■■□□□ 1.6
CPSF7Q8N684 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.04■■□□□ 1.6
CPSF7Q8N684 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CPSF7Q8N684 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
CPSF7Q8N684 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
CPSF7Q8N684 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.03■■□□□ 1.6
CPSF7Q8N684 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CPSF7Q8N684 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CPSF7Q8N684 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CPSF7Q8N684 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CPSF7Q8N684 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CPSF7Q8N684 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CPSF7Q8N684 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CPSF7Q8N684 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.01■■□□□ 1.59
CPSF7Q8N684 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
CPSF7Q8N684 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.01■■□□□ 1.59
CPSF7Q8N684 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
CPSF7Q8N684 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CPSF7Q8N684 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25■■□□□ 1.59
CPSF7Q8N684 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
CPSF7Q8N684 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.99■■□□□ 1.59
CPSF7Q8N684 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CPSF7Q8N684 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CPSF7Q8N684 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms