Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RAI1Q7Z5J4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.47■■□□□ 1.19
RAI1Q7Z5J4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAI1Q7Z5J4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAI1Q7Z5J4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAI1Q7Z5J4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RAI1Q7Z5J4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAI1Q7Z5J4 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.45■■□□□ 1.18
RAI1Q7Z5J4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RAI1Q7Z5J4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RAI1Q7Z5J4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RAI1Q7Z5J4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RAI1Q7Z5J4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RAI1Q7Z5J4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC22.44■■□□□ 1.18
RAI1Q7Z5J4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RAI1Q7Z5J4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RAI1Q7Z5J4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RAI1Q7Z5J4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RAI1Q7Z5J4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC22.42■■□□□ 1.18
RAI1Q7Z5J4 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.41■■□□□ 1.18
RAI1Q7Z5J4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.41■■□□□ 1.18
RAI1Q7Z5J4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RAI1Q7Z5J4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.41■■□□□ 1.18
RAI1Q7Z5J4 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.41■■□□□ 1.18
RAI1Q7Z5J4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAI1Q7Z5J4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.41■■□□□ 1.18
RAI1Q7Z5J4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.41■■□□□ 1.18
RAI1Q7Z5J4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
RAI1Q7Z5J4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAI1Q7Z5J4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAI1Q7Z5J4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
RAI1Q7Z5J4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RAI1Q7Z5J4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.39■■□□□ 1.18
RAI1Q7Z5J4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC22.39■■□□□ 1.18
RAI1Q7Z5J4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAI1Q7Z5J4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
RAI1Q7Z5J4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.39■■□□□ 1.17
RAI1Q7Z5J4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
RAI1Q7Z5J4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC22.38■■□□□ 1.17
RAI1Q7Z5J4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC22.38■■□□□ 1.17
RAI1Q7Z5J4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.38■■□□□ 1.17
RAI1Q7Z5J4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.37■■□□□ 1.17
RAI1Q7Z5J4 AC010864.1-201ENST00000609407 1511 ntBASIC22.37■■□□□ 1.17
RAI1Q7Z5J4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.36■■□□□ 1.17
RAI1Q7Z5J4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
RAI1Q7Z5J4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RAI1Q7Z5J4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAI1Q7Z5J4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RAI1Q7Z5J4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAI1Q7Z5J4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAI1Q7Z5J4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC22.34■■□□□ 1.17
RAI1Q7Z5J4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RAI1Q7Z5J4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RAI1Q7Z5J4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RAI1Q7Z5J4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RAI1Q7Z5J4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RAI1Q7Z5J4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
RAI1Q7Z5J4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RAI1Q7Z5J4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
RAI1Q7Z5J4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAI1Q7Z5J4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAI1Q7Z5J4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.32■■□□□ 1.16
RAI1Q7Z5J4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.32■■□□□ 1.16
RAI1Q7Z5J4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.31■■□□□ 1.16
RAI1Q7Z5J4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
RAI1Q7Z5J4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.31■■□□□ 1.16
RAI1Q7Z5J4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
RAI1Q7Z5J4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAI1Q7Z5J4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RAI1Q7Z5J4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAI1Q7Z5J4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAI1Q7Z5J4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RAI1Q7Z5J4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RAI1Q7Z5J4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAI1Q7Z5J4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RAI1Q7Z5J4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.28■■□□□ 1.16
RAI1Q7Z5J4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.28■■□□□ 1.16
RAI1Q7Z5J4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RAI1Q7Z5J4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RAI1Q7Z5J4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RAI1Q7Z5J4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RAI1Q7Z5J4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RAI1Q7Z5J4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RAI1Q7Z5J4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RAI1Q7Z5J4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAI1Q7Z5J4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAI1Q7Z5J4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAI1Q7Z5J4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RAI1Q7Z5J4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RAI1Q7Z5J4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
RAI1Q7Z5J4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAI1Q7Z5J4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.26■■□□□ 1.15
RAI1Q7Z5J4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.26■■□□□ 1.15
RAI1Q7Z5J4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.26■■□□□ 1.15
RAI1Q7Z5J4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RAI1Q7Z5J4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
RAI1Q7Z5J4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
RAI1Q7Z5J4 RARRES2P2-201ENST00000394842 485 ntBASIC22.25■■□□□ 1.15
RAI1Q7Z5J4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RAI1Q7Z5J4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms