Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PPP4R3CPQ6ZMV5 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
PPP4R3CPQ6ZMV5 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
PPP4R3CPQ6ZMV5 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.06■■■□□ 2.24
PPP4R3CPQ6ZMV5 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC29.06■■■□□ 2.24
PPP4R3CPQ6ZMV5 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
PPP4R3CPQ6ZMV5 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC29.06■■■□□ 2.24
PPP4R3CPQ6ZMV5 ABCB10P3-201ENST00000561950 2166 ntBASIC29.06■■■□□ 2.24
PPP4R3CPQ6ZMV5 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.05■■■□□ 2.24
PPP4R3CPQ6ZMV5 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
PPP4R3CPQ6ZMV5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
PPP4R3CPQ6ZMV5 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
PPP4R3CPQ6ZMV5 MIR6090-201ENST00000622481 60 ntBASIC29.04■■■□□ 2.24
PPP4R3CPQ6ZMV5 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
PPP4R3CPQ6ZMV5 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
PPP4R3CPQ6ZMV5 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
PPP4R3CPQ6ZMV5 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
PPP4R3CPQ6ZMV5 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
PPP4R3CPQ6ZMV5 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.01■■■□□ 2.23
PPP4R3CPQ6ZMV5 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
PPP4R3CPQ6ZMV5 ABHD17AP4-201ENST00000411545 909 ntBASIC29.01■■■□□ 2.23
PPP4R3CPQ6ZMV5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.01■■■□□ 2.23
PPP4R3CPQ6ZMV5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
PPP4R3CPQ6ZMV5 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.01■■■□□ 2.23
PPP4R3CPQ6ZMV5 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
PPP4R3CPQ6ZMV5 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29■■■□□ 2.23
PPP4R3CPQ6ZMV5 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
PPP4R3CPQ6ZMV5 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
PPP4R3CPQ6ZMV5 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29■■■□□ 2.23
PPP4R3CPQ6ZMV5 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
PPP4R3CPQ6ZMV5 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
PPP4R3CPQ6ZMV5 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
PPP4R3CPQ6ZMV5 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
PPP4R3CPQ6ZMV5 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.99■■■□□ 2.23
PPP4R3CPQ6ZMV5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.99■■■□□ 2.23
PPP4R3CPQ6ZMV5 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.99■■■□□ 2.23
PPP4R3CPQ6ZMV5 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
PPP4R3CPQ6ZMV5 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
PPP4R3CPQ6ZMV5 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
PPP4R3CPQ6ZMV5 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.97■■■□□ 2.23
PPP4R3CPQ6ZMV5 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC28.97■■■□□ 2.23
PPP4R3CPQ6ZMV5 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.97■■■□□ 2.23
PPP4R3CPQ6ZMV5 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.97■■■□□ 2.23
PPP4R3CPQ6ZMV5 PAX6-247ENST00000638965 979 ntTSL 5 BASIC28.97■■■□□ 2.23
PPP4R3CPQ6ZMV5 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.96■■■□□ 2.23
PPP4R3CPQ6ZMV5 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
PPP4R3CPQ6ZMV5 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.23
PPP4R3CPQ6ZMV5 AC010864.1-201ENST00000609407 1511 ntBASIC28.95■■■□□ 2.23
PPP4R3CPQ6ZMV5 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC28.95■■■□□ 2.22
PPP4R3CPQ6ZMV5 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.95■■■□□ 2.22
PPP4R3CPQ6ZMV5 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.95■■■□□ 2.22
PPP4R3CPQ6ZMV5 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
PPP4R3CPQ6ZMV5 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
PPP4R3CPQ6ZMV5 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
PPP4R3CPQ6ZMV5 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
PPP4R3CPQ6ZMV5 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.94■■■□□ 2.22
PPP4R3CPQ6ZMV5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.94■■■□□ 2.22
PPP4R3CPQ6ZMV5 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
PPP4R3CPQ6ZMV5 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.93■■■□□ 2.22
PPP4R3CPQ6ZMV5 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
PPP4R3CPQ6ZMV5 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.92■■■□□ 2.22
PPP4R3CPQ6ZMV5 DUX4L29-201ENST00000425409 679 ntBASIC28.92■■■□□ 2.22
PPP4R3CPQ6ZMV5 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
PPP4R3CPQ6ZMV5 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
PPP4R3CPQ6ZMV5 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
PPP4R3CPQ6ZMV5 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.9■■■□□ 2.22
PPP4R3CPQ6ZMV5 AC021231.2-201ENST00000594613 730 ntBASIC28.9■■■□□ 2.22
PPP4R3CPQ6ZMV5 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
PPP4R3CPQ6ZMV5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
PPP4R3CPQ6ZMV5 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
PPP4R3CPQ6ZMV5 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
PPP4R3CPQ6ZMV5 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC28.88■■■□□ 2.21
PPP4R3CPQ6ZMV5 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PPP4R3CPQ6ZMV5 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
PPP4R3CPQ6ZMV5 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
PPP4R3CPQ6ZMV5 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PPP4R3CPQ6ZMV5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PPP4R3CPQ6ZMV5 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
PPP4R3CPQ6ZMV5 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
PPP4R3CPQ6ZMV5 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PPP4R3CPQ6ZMV5 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PPP4R3CPQ6ZMV5 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
PPP4R3CPQ6ZMV5 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.84■■■□□ 2.21
PPP4R3CPQ6ZMV5 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
PPP4R3CPQ6ZMV5 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
PPP4R3CPQ6ZMV5 ZNRF2P2-203ENST00000454624 420 ntBASIC28.84■■■□□ 2.21
PPP4R3CPQ6ZMV5 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.84■■■□□ 2.21
PPP4R3CPQ6ZMV5 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PPP4R3CPQ6ZMV5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.83■■■□□ 2.21
PPP4R3CPQ6ZMV5 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
PPP4R3CPQ6ZMV5 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.82■■■□□ 2.2
PPP4R3CPQ6ZMV5 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
PPP4R3CPQ6ZMV5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
PPP4R3CPQ6ZMV5 MIR7108-201ENST00000614319 87 ntBASIC28.81■■■□□ 2.2
PPP4R3CPQ6ZMV5 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PPP4R3CPQ6ZMV5 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC28.8■■■□□ 2.2
PPP4R3CPQ6ZMV5 AC139426.1-201ENST00000568218 2529 ntBASIC28.8■■■□□ 2.2
PPP4R3CPQ6ZMV5 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
PPP4R3CPQ6ZMV5 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.79■■■□□ 2.2
PPP4R3CPQ6ZMV5 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms