Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VMA21Q3ZAQ7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VMA21Q3ZAQ7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
VMA21Q3ZAQ7 SUZ12P1-203ENST00000578195 985 ntBASIC20.85■□□□□ 0.93
VMA21Q3ZAQ7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VMA21Q3ZAQ7 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.85■□□□□ 0.93
VMA21Q3ZAQ7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VMA21Q3ZAQ7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VMA21Q3ZAQ7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VMA21Q3ZAQ7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VMA21Q3ZAQ7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VMA21Q3ZAQ7 AC005559.1-201ENST00000589661 871 ntBASIC20.83■□□□□ 0.93
VMA21Q3ZAQ7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
VMA21Q3ZAQ7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VMA21Q3ZAQ7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
VMA21Q3ZAQ7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
VMA21Q3ZAQ7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VMA21Q3ZAQ7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.8■□□□□ 0.92
VMA21Q3ZAQ7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VMA21Q3ZAQ7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VMA21Q3ZAQ7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
VMA21Q3ZAQ7 AP004833.2-201ENST00000532228 1454 ntBASIC20.78■□□□□ 0.92
VMA21Q3ZAQ7 AC127502.1-201ENST00000399971 1502 ntBASIC20.78■□□□□ 0.92
VMA21Q3ZAQ7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VMA21Q3ZAQ7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
VMA21Q3ZAQ7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.77■□□□□ 0.92
VMA21Q3ZAQ7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VMA21Q3ZAQ7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VMA21Q3ZAQ7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
VMA21Q3ZAQ7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VMA21Q3ZAQ7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VMA21Q3ZAQ7 AC142086.6-201ENST00000621154 1765 ntBASIC20.76■□□□□ 0.91
VMA21Q3ZAQ7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VMA21Q3ZAQ7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VMA21Q3ZAQ7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.75■□□□□ 0.91
VMA21Q3ZAQ7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
VMA21Q3ZAQ7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VMA21Q3ZAQ7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.75■□□□□ 0.91
VMA21Q3ZAQ7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
VMA21Q3ZAQ7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VMA21Q3ZAQ7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VMA21Q3ZAQ7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
VMA21Q3ZAQ7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.73■□□□□ 0.91
VMA21Q3ZAQ7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VMA21Q3ZAQ7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VMA21Q3ZAQ7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VMA21Q3ZAQ7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.73■□□□□ 0.91
VMA21Q3ZAQ7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VMA21Q3ZAQ7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VMA21Q3ZAQ7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
VMA21Q3ZAQ7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
VMA21Q3ZAQ7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.72■□□□□ 0.91
VMA21Q3ZAQ7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VMA21Q3ZAQ7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.71■□□□□ 0.91
VMA21Q3ZAQ7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VMA21Q3ZAQ7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
VMA21Q3ZAQ7 AC108673.1-201ENST00000510422 1159 ntBASIC20.7■□□□□ 0.9
VMA21Q3ZAQ7 MIR3665-201ENST00000578708 105 ntBASIC20.7■□□□□ 0.9
VMA21Q3ZAQ7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VMA21Q3ZAQ7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.7■□□□□ 0.9
VMA21Q3ZAQ7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.69■□□□□ 0.9
VMA21Q3ZAQ7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.69■□□□□ 0.9
VMA21Q3ZAQ7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VMA21Q3ZAQ7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.69■□□□□ 0.9
VMA21Q3ZAQ7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VMA21Q3ZAQ7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VMA21Q3ZAQ7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.68■□□□□ 0.9
VMA21Q3ZAQ7 DRD5P2-201ENST00000421395 2012 ntBASIC20.68■□□□□ 0.9
VMA21Q3ZAQ7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.68■□□□□ 0.9
VMA21Q3ZAQ7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.68■□□□□ 0.9
VMA21Q3ZAQ7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VMA21Q3ZAQ7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.68■□□□□ 0.9
VMA21Q3ZAQ7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VMA21Q3ZAQ7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VMA21Q3ZAQ7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
VMA21Q3ZAQ7 AP006261.1-201ENST00000584783 668 ntBASIC20.67■□□□□ 0.9
VMA21Q3ZAQ7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
VMA21Q3ZAQ7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VMA21Q3ZAQ7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.66■□□□□ 0.9
VMA21Q3ZAQ7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
VMA21Q3ZAQ7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VMA21Q3ZAQ7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VMA21Q3ZAQ7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.65■□□□□ 0.9
VMA21Q3ZAQ7 DUX4L28-201ENST00000623687 678 ntBASIC20.65■□□□□ 0.9
VMA21Q3ZAQ7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VMA21Q3ZAQ7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VMA21Q3ZAQ7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VMA21Q3ZAQ7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VMA21Q3ZAQ7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.63■□□□□ 0.89
VMA21Q3ZAQ7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
VMA21Q3ZAQ7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.63■□□□□ 0.89
VMA21Q3ZAQ7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.63■□□□□ 0.89
VMA21Q3ZAQ7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VMA21Q3ZAQ7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.62■□□□□ 0.89
VMA21Q3ZAQ7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VMA21Q3ZAQ7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VMA21Q3ZAQ7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VMA21Q3ZAQ7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VMA21Q3ZAQ7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VMA21Q3ZAQ7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms