Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.32■■■□□ 2.12
DCAF4L1Q3SXM0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.32■■■□□ 2.12
DCAF4L1Q3SXM0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.32■■■□□ 2.12
DCAF4L1Q3SXM0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.31■■■□□ 2.12
DCAF4L1Q3SXM0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.31■■■□□ 2.12
DCAF4L1Q3SXM0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.31■■■□□ 2.12
DCAF4L1Q3SXM0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
DCAF4L1Q3SXM0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
DCAF4L1Q3SXM0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
DCAF4L1Q3SXM0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.3■■■□□ 2.12
DCAF4L1Q3SXM0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.3■■■□□ 2.12
DCAF4L1Q3SXM0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.3■■■□□ 2.12
DCAF4L1Q3SXM0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.3■■■□□ 2.12
DCAF4L1Q3SXM0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
DCAF4L1Q3SXM0 ST7-AS1-201ENST00000456775 1889 ntBASIC28.29■■■□□ 2.12
DCAF4L1Q3SXM0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
DCAF4L1Q3SXM0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.29■■■□□ 2.12
DCAF4L1Q3SXM0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
DCAF4L1Q3SXM0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.27■■■□□ 2.12
DCAF4L1Q3SXM0 MIR3648-2-201ENST00000581792 180 ntBASIC28.26■■■□□ 2.11
DCAF4L1Q3SXM0 MIR3648-1-201ENST00000615959 180 ntBASIC28.26■■■□□ 2.11
DCAF4L1Q3SXM0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.25■■■□□ 2.11
DCAF4L1Q3SXM0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
DCAF4L1Q3SXM0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
DCAF4L1Q3SXM0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.25■■■□□ 2.11
DCAF4L1Q3SXM0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
DCAF4L1Q3SXM0 CR559946.2-201ENST00000623684 991 ntBASIC28.24■■■□□ 2.11
DCAF4L1Q3SXM0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.24■■■□□ 2.11
DCAF4L1Q3SXM0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
DCAF4L1Q3SXM0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
DCAF4L1Q3SXM0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
DCAF4L1Q3SXM0 DUX4L13-201ENST00000554103 1267 ntBASIC28.23■■■□□ 2.11
DCAF4L1Q3SXM0 DUX4L15-201ENST00000611059 1267 ntBASIC28.23■■■□□ 2.11
DCAF4L1Q3SXM0 DUX4L23-201ENST00000615195 1269 ntBASIC28.23■■■□□ 2.11
DCAF4L1Q3SXM0 DUX4L24-201ENST00000617576 1269 ntBASIC28.23■■■□□ 2.11
DCAF4L1Q3SXM0 DUX4L22-201ENST00000618238 1269 ntBASIC28.23■■■□□ 2.11
DCAF4L1Q3SXM0 DUX4L20-201ENST00000619712 1269 ntBASIC28.23■■■□□ 2.11
DCAF4L1Q3SXM0 DUX4L21-201ENST00000622058 1269 ntBASIC28.23■■■□□ 2.11
DCAF4L1Q3SXM0 DUX4L10-201ENST00000622460 1267 ntBASIC28.23■■■□□ 2.11
DCAF4L1Q3SXM0 DUX4L25-201ENST00000624915 1269 ntBASIC28.23■■■□□ 2.11
DCAF4L1Q3SXM0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
DCAF4L1Q3SXM0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
DCAF4L1Q3SXM0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
DCAF4L1Q3SXM0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
DCAF4L1Q3SXM0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
DCAF4L1Q3SXM0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
DCAF4L1Q3SXM0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
DCAF4L1Q3SXM0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
DCAF4L1Q3SXM0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
DCAF4L1Q3SXM0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.21■■■□□ 2.11
DCAF4L1Q3SXM0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
DCAF4L1Q3SXM0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
DCAF4L1Q3SXM0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
DCAF4L1Q3SXM0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
DCAF4L1Q3SXM0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
DCAF4L1Q3SXM0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
DCAF4L1Q3SXM0 AC016575.1-201ENST00000607026 382 ntBASIC28.2■■■□□ 2.1
DCAF4L1Q3SXM0 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.2■■■□□ 2.1
DCAF4L1Q3SXM0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
DCAF4L1Q3SXM0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.19■■■□□ 2.1
DCAF4L1Q3SXM0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
DCAF4L1Q3SXM0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
DCAF4L1Q3SXM0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.18■■■□□ 2.1
DCAF4L1Q3SXM0 MIR639-201ENST00000384974 98 ntBASIC28.17■■■□□ 2.1
DCAF4L1Q3SXM0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.17■■■□□ 2.1
DCAF4L1Q3SXM0 AC135983.2-203ENST00000454486 1613 ntBASIC28.17■■■□□ 2.1
DCAF4L1Q3SXM0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.16■■■□□ 2.1
DCAF4L1Q3SXM0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
DCAF4L1Q3SXM0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
DCAF4L1Q3SXM0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
DCAF4L1Q3SXM0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.15■■■□□ 2.1
DCAF4L1Q3SXM0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
DCAF4L1Q3SXM0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
DCAF4L1Q3SXM0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
DCAF4L1Q3SXM0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
DCAF4L1Q3SXM0 WHAMMP2-203ENST00000563942 1603 ntBASIC28.12■■■□□ 2.09
DCAF4L1Q3SXM0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
DCAF4L1Q3SXM0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
DCAF4L1Q3SXM0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.11■■■□□ 2.09
DCAF4L1Q3SXM0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
DCAF4L1Q3SXM0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.11■■■□□ 2.09
DCAF4L1Q3SXM0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.11■■■□□ 2.09
DCAF4L1Q3SXM0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
DCAF4L1Q3SXM0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
DCAF4L1Q3SXM0 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.1■■■□□ 2.09
DCAF4L1Q3SXM0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
DCAF4L1Q3SXM0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.07■■■□□ 2.08
DCAF4L1Q3SXM0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
DCAF4L1Q3SXM0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
DCAF4L1Q3SXM0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.06■■■□□ 2.08
DCAF4L1Q3SXM0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
DCAF4L1Q3SXM0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
DCAF4L1Q3SXM0 MIR4449-201ENST00000578365 66 ntBASIC28.06■■■□□ 2.08
DCAF4L1Q3SXM0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
DCAF4L1Q3SXM0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
DCAF4L1Q3SXM0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
DCAF4L1Q3SXM0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
DCAF4L1Q3SXM0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.02■■■□□ 2.08
DCAF4L1Q3SXM0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.02■■■□□ 2.08
DCAF4L1Q3SXM0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms