Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC004987.1-201ENST00000428627 508 ntBASIC25.8■■□□□ 1.72
RSPO4Q2I0M5 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.8■■□□□ 1.72
RSPO4Q2I0M5 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RSPO4Q2I0M5 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
RSPO4Q2I0M5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RSPO4Q2I0M5 ATP5G2P3-201ENST00000429083 425 ntBASIC25.77■■□□□ 1.72
RSPO4Q2I0M5 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.77■■□□□ 1.72
RSPO4Q2I0M5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RSPO4Q2I0M5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RSPO4Q2I0M5 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RSPO4Q2I0M5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.76■■□□□ 1.71
RSPO4Q2I0M5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RSPO4Q2I0M5 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RSPO4Q2I0M5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.76■■□□□ 1.71
RSPO4Q2I0M5 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.76■■□□□ 1.71
RSPO4Q2I0M5 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
RSPO4Q2I0M5 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RSPO4Q2I0M5 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RSPO4Q2I0M5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
RSPO4Q2I0M5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.73■■□□□ 1.71
RSPO4Q2I0M5 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC25.72■■□□□ 1.71
RSPO4Q2I0M5 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
RSPO4Q2I0M5 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.71■■□□□ 1.71
RSPO4Q2I0M5 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RSPO4Q2I0M5 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RSPO4Q2I0M5 KRT18P60-201ENST00000312876 1297 ntBASIC25.7■■□□□ 1.7
RSPO4Q2I0M5 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.69■■□□□ 1.7
RSPO4Q2I0M5 AL035685.1-201ENST00000636663 812 ntBASIC25.69■■□□□ 1.7
RSPO4Q2I0M5 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RSPO4Q2I0M5 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RSPO4Q2I0M5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.68■■□□□ 1.7
RSPO4Q2I0M5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.67■■□□□ 1.7
RSPO4Q2I0M5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RSPO4Q2I0M5 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
RSPO4Q2I0M5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RSPO4Q2I0M5 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
RSPO4Q2I0M5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.64■■□□□ 1.7
RSPO4Q2I0M5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.63■■□□□ 1.69
RSPO4Q2I0M5 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RSPO4Q2I0M5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.63■■□□□ 1.69
RSPO4Q2I0M5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.63■■□□□ 1.69
RSPO4Q2I0M5 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
RSPO4Q2I0M5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.63■■□□□ 1.69
RSPO4Q2I0M5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RSPO4Q2I0M5 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RSPO4Q2I0M5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RSPO4Q2I0M5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.61■■□□□ 1.69
RSPO4Q2I0M5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
RSPO4Q2I0M5 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
RSPO4Q2I0M5 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RSPO4Q2I0M5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RSPO4Q2I0M5 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RSPO4Q2I0M5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
RSPO4Q2I0M5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RSPO4Q2I0M5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
RSPO4Q2I0M5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.57■■□□□ 1.68
RSPO4Q2I0M5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RSPO4Q2I0M5 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RSPO4Q2I0M5 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RSPO4Q2I0M5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
RSPO4Q2I0M5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.56■■□□□ 1.68
RSPO4Q2I0M5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.56■■□□□ 1.68
RSPO4Q2I0M5 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.55■■□□□ 1.68
RSPO4Q2I0M5 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RSPO4Q2I0M5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
RSPO4Q2I0M5 AL451085.2-201ENST00000605085 799 ntBASIC25.55■■□□□ 1.68
RSPO4Q2I0M5 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RSPO4Q2I0M5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RSPO4Q2I0M5 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RSPO4Q2I0M5 MIR935-201ENST00000401179 91 ntBASIC25.54■■□□□ 1.68
RSPO4Q2I0M5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RSPO4Q2I0M5 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RSPO4Q2I0M5 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RSPO4Q2I0M5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RSPO4Q2I0M5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.52■■□□□ 1.68
RSPO4Q2I0M5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.52■■□□□ 1.68
RSPO4Q2I0M5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.51■■□□□ 1.68
RSPO4Q2I0M5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RSPO4Q2I0M5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.51■■□□□ 1.67
RSPO4Q2I0M5 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RSPO4Q2I0M5 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.51■■□□□ 1.67
RSPO4Q2I0M5 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RSPO4Q2I0M5 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RSPO4Q2I0M5 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.5■■□□□ 1.67
RSPO4Q2I0M5 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.5■■□□□ 1.67
RSPO4Q2I0M5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.5■■□□□ 1.67
RSPO4Q2I0M5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.5■■□□□ 1.67
RSPO4Q2I0M5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RSPO4Q2I0M5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.49■■□□□ 1.67
RSPO4Q2I0M5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RSPO4Q2I0M5 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RSPO4Q2I0M5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.49■■□□□ 1.67
RSPO4Q2I0M5 AC060814.1-201ENST00000554326 538 ntBASIC25.49■■□□□ 1.67
RSPO4Q2I0M5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RSPO4Q2I0M5 AC131212.1-201ENST00000613771 668 ntBASIC25.48■■□□□ 1.67
RSPO4Q2I0M5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.47■■□□□ 1.67
RSPO4Q2I0M5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.47■■□□□ 1.67
RSPO4Q2I0M5 LINC00273-201ENST00000539813 1452 ntBASIC25.47■■□□□ 1.67
RSPO4Q2I0M5 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RSPO4Q2I0M5 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms