Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 YRF1-6YNL339C 5580 nt7.06□□□□□ -1.28
HRD1Q08109 YRF1-7YPL283C 5580 nt7.06□□□□□ -1.28
HRD1Q08109 NDE1YMR145C 1683 nt7.06□□□□□ -1.28
HRD1Q08109 POT1YIL160C 1254 nt7.06□□□□□ -1.28
HRD1Q08109 FRT1YOR324C 1809 nt7.04□□□□□ -1.28
HRD1Q08109 YDR510C-AYDR510C-A 117 nt7.04□□□□□ -1.28
HRD1Q08109 GPM1YKL152C 744 nt7.04□□□□□ -1.28
HRD1Q08109 NPP2YEL016C 1482 nt7.04□□□□□ -1.28
HRD1Q08109 tE(CUC)DtE(CUC)D 72 nt7.03□□□□□ -1.28
HRD1Q08109 tE(CUC)ItE(CUC)I 72 nt7.03□□□□□ -1.28
HRD1Q08109 YBL095WYBL095W 813 nt7.03□□□□□ -1.28
HRD1Q08109 LEU2YCL018W 1095 nt7.03□□□□□ -1.28
HRD1Q08109 KGD2YDR148C 1392 nt7.03□□□□□ -1.28
HRD1Q08109 TPC1YGR096W 945 nt7.02□□□□□ -1.29
HRD1Q08109 SBP1YHL034C 885 nt7.02□□□□□ -1.29
HRD1Q08109 YKL053WYKL053W 375 nt7.02□□□□□ -1.29
HRD1Q08109 YMC2YBR104W 990 nt7.02□□□□□ -1.29
HRD1Q08109 BEM1YBR200W 1656 nt7.02□□□□□ -1.29
HRD1Q08109 GGA2YHR108W 1758 nt7.01□□□□□ -1.29
HRD1Q08109 MIM1YOL026C 342 nt7□□□□□ -1.29
HRD1Q08109 CCR4YAL021C 2514 nt7□□□□□ -1.29
HRD1Q08109 KRE1YNL322C 942 nt6.98□□□□□ -1.29
HRD1Q08109 AFG2YLR397C 2343 nt6.98□□□□□ -1.29
HRD1Q08109 GGC1YDL198C 903 nt6.97□□□□□ -1.29
HRD1Q08109 GSF2YML048W 1212 nt6.97□□□□□ -1.29
HRD1Q08109 SRP54YPR088C 1626 nt6.97□□□□□ -1.29
HRD1Q08109 NAM8YHR086W 1572 nt6.96□□□□□ -1.29
HRD1Q08109 SAN1YDR143C 1833 nt6.96□□□□□ -1.3
HRD1Q08109 AAT1YKL106W 1356 nt6.95□□□□□ -1.3
HRD1Q08109 MRS4YKR052C 915 nt6.95□□□□□ -1.3
HRD1Q08109 STE4YOR212W 1272 nt6.95□□□□□ -1.3
HRD1Q08109 CTF3YLR381W 2202 nt6.95□□□□□ -1.3
HRD1Q08109 THI3YDL080C 1830 nt6.94□□□□□ -1.3
HRD1Q08109 HBS1YKR084C 1836 nt6.94□□□□□ -1.3
HRD1Q08109 EMC3YKL207W 762 nt6.94□□□□□ -1.3
HRD1Q08109 SPE2YOL052C 1191 nt6.94□□□□□ -1.3
HRD1Q08109 GAS1YMR307W 1680 nt6.93□□□□□ -1.3
HRD1Q08109 YEL023CYEL023C 2049 nt6.93□□□□□ -1.3
HRD1Q08109 DUS3YLR401C 2007 nt6.93□□□□□ -1.3
HRD1Q08109 tD(GUC)BtD(GUC)B 72 nt6.93□□□□□ -1.3
HRD1Q08109 tD(GUC)DtD(GUC)D 72 nt6.93□□□□□ -1.3
HRD1Q08109 tD(GUC)G1tD(GUC)G1 72 nt6.93□□□□□ -1.3
HRD1Q08109 tD(GUC)G2tD(GUC)G2 72 nt6.93□□□□□ -1.3
HRD1Q08109 tD(GUC)I1tD(GUC)I1 72 nt6.93□□□□□ -1.3
HRD1Q08109 tD(GUC)I2tD(GUC)I2 72 nt6.93□□□□□ -1.3
HRD1Q08109 tD(GUC)J1tD(GUC)J1 72 nt6.93□□□□□ -1.3
HRD1Q08109 tD(GUC)J2tD(GUC)J2 72 nt6.93□□□□□ -1.3
HRD1Q08109 tD(GUC)J3tD(GUC)J3 72 nt6.93□□□□□ -1.3
HRD1Q08109 tD(GUC)J4tD(GUC)J4 72 nt6.93□□□□□ -1.3
HRD1Q08109 tD(GUC)KtD(GUC)K 72 nt6.93□□□□□ -1.3
HRD1Q08109 tD(GUC)L1tD(GUC)L1 72 nt6.93□□□□□ -1.3
HRD1Q08109 tD(GUC)L2tD(GUC)L2 72 nt6.93□□□□□ -1.3
HRD1Q08109 tD(GUC)MtD(GUC)M 72 nt6.93□□□□□ -1.3
HRD1Q08109 tD(GUC)OtD(GUC)O 72 nt6.93□□□□□ -1.3
HRD1Q08109 CPD1YGR247W 720 nt6.93□□□□□ -1.3
HRD1Q08109 YMR316C-BYMR316C-B 309 nt6.93□□□□□ -1.3
HRD1Q08109 TUB4YLR212C 1422 nt6.93□□□□□ -1.3
HRD1Q08109 TRP2YER090W 1524 nt6.92□□□□□ -1.3
HRD1Q08109 FET5YFL041W 1869 nt6.92□□□□□ -1.3
HRD1Q08109 REX2YLR059C 810 nt6.91□□□□□ -1.3
HRD1Q08109 YPT11YNL304W 1254 nt6.91□□□□□ -1.3
HRD1Q08109 PTC6YCR079W 1329 nt6.91□□□□□ -1.3
HRD1Q08109 STF1YDL130W-A 261 nt6.89□□□□□ -1.31
HRD1Q08109 NIF3YGL221C 867 nt6.89□□□□□ -1.31
HRD1Q08109 FSH2YMR222C 672 nt6.89□□□□□ -1.31
HRD1Q08109 POP2YNR052C 1302 nt6.88□□□□□ -1.31
HRD1Q08109 ESS1YJR017C 513 nt6.87□□□□□ -1.31
HRD1Q08109 APS2YJR058C 444 nt6.87□□□□□ -1.31
HRD1Q08109 YKR012CYKR012C 378 nt6.87□□□□□ -1.31
HRD1Q08109 THP3YPR045C 1413 nt6.86□□□□□ -1.31
HRD1Q08109 ORT1YOR130C 879 nt6.86□□□□□ -1.31
HRD1Q08109 AAC3YBR085W 924 nt6.86□□□□□ -1.31
HRD1Q08109 HXT11YOL156W 1704 nt6.86□□□□□ -1.31
HRD1Q08109 YJL009WYJL009W 327 nt6.85□□□□□ -1.31
HRD1Q08109 YLR349WYLR349W 507 nt6.85□□□□□ -1.31
HRD1Q08109 GUT1YHL032C 2130 nt6.85□□□□□ -1.31
HRD1Q08109 YIL108WYIL108W 2091 nt6.85□□□□□ -1.31
HRD1Q08109 TOP3YLR234W 1971 nt6.84□□□□□ -1.31
HRD1Q08109 RSM7YJR113C 744 nt6.84□□□□□ -1.31
HRD1Q08109 TMS1YDR105C 1422 nt6.84□□□□□ -1.32
HRD1Q08109 ADH7YCR105W 1086 nt6.83□□□□□ -1.32
HRD1Q08109 LYS20YDL182W 1287 nt6.83□□□□□ -1.32
HRD1Q08109 YDR306CYDR306C 1437 nt6.83□□□□□ -1.32
HRD1Q08109 YMR210WYMR210W 1350 nt6.82□□□□□ -1.32
HRD1Q08109 AIM34YMR003W 597 nt6.82□□□□□ -1.32
HRD1Q08109 snR86snR86 1004 nt6.81□□□□□ -1.32
HRD1Q08109 YRF1-1YDR545W 5391 nt6.81□□□□□ -1.32
HRD1Q08109 YRF1-5YLR467W 5391 nt6.81□□□□□ -1.32
HRD1Q08109 YRF1-8YOR396W 5391 nt6.81□□□□□ -1.32
HRD1Q08109 CMK2YOL016C 1344 nt6.8□□□□□ -1.32
HRD1Q08109 ADE16YLR028C 1776 nt6.8□□□□□ -1.32
HRD1Q08109 PAU5YFL020C 369 nt6.8□□□□□ -1.32
HRD1Q08109 NAS2YIL007C 663 nt6.8□□□□□ -1.32
HRD1Q08109 YIR035CYIR035C 765 nt6.8□□□□□ -1.32
HRD1Q08109 SDS24YBR214W 1584 nt6.79□□□□□ -1.32
HRD1Q08109 PAR32YDL173W 888 nt6.79□□□□□ -1.32
HRD1Q08109 PAU15YIR041W 375 nt6.79□□□□□ -1.32
HRD1Q08109 YJR149WYJR149W 1215 nt6.79□□□□□ -1.32
HRD1Q08109 ENO1YGR254W 1314 nt6.78□□□□□ -1.32
HRD1Q08109 SRM1YGL097W 1449 nt6.78□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms