Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 RIM2YBR192W 1134 nt9.98□□□□□ -0.81
BRE1Q07457 PHB2YGR231C 933 nt9.97□□□□□ -0.81
BRE1Q07457 IPL1YPL209C 1104 nt9.97□□□□□ -0.81
BRE1Q07457 KRR1YCL059C 951 nt9.96□□□□□ -0.82
BRE1Q07457 SRP54YPR088C 1626 nt9.96□□□□□ -0.82
BRE1Q07457 HMG2YLR450W 3138 nt9.95□□□□□ -0.82
BRE1Q07457 MOB1YIL106W 945 nt9.95□□□□□ -0.82
BRE1Q07457 KGD2YDR148C 1392 nt9.95□□□□□ -0.82
BRE1Q07457 FRA1YLL029W 2250 nt9.95□□□□□ -0.82
BRE1Q07457 FLX1YIL134W 936 nt9.94□□□□□ -0.82
BRE1Q07457 REX2YLR059C 810 nt9.94□□□□□ -0.82
BRE1Q07457 SAN1YDR143C 1833 nt9.93□□□□□ -0.82
BRE1Q07457 MDM35YKL053C-A 261 nt9.93□□□□□ -0.82
BRE1Q07457 YCR025CYCR025C 411 nt9.92□□□□□ -0.82
BRE1Q07457 DPL1YDR294C 1770 nt9.92□□□□□ -0.82
BRE1Q07457 DMA2YNL116W 1569 nt9.91□□□□□ -0.82
BRE1Q07457 SDS24YBR214W 1584 nt9.91□□□□□ -0.82
BRE1Q07457 SLG1YOR008C 1137 nt9.9□□□□□ -0.82
BRE1Q07457 ACO2YJL200C 2370 nt9.89□□□□□ -0.83
BRE1Q07457 TPO4YOR273C 1980 nt9.88□□□□□ -0.83
BRE1Q07457 VBA3YCL069W 1377 nt9.88□□□□□ -0.83
BRE1Q07457 SBP1YHL034C 885 nt9.86□□□□□ -0.83
BRE1Q07457 ENO1YGR254W 1314 nt9.85□□□□□ -0.83
BRE1Q07457 CYC3YAL039C 810 nt9.85□□□□□ -0.83
BRE1Q07457 YPT11YNL304W 1254 nt9.83□□□□□ -0.84
BRE1Q07457 GAS1YMR307W 1680 nt9.83□□□□□ -0.84
BRE1Q07457 PTC6YCR079W 1329 nt9.82□□□□□ -0.84
BRE1Q07457 LEU4YNL104C 1860 nt9.82□□□□□ -0.84
BRE1Q07457 LYS20YDL182W 1287 nt9.8□□□□□ -0.84
BRE1Q07457 YDR467CYDR467C 327 nt9.8□□□□□ -0.84
BRE1Q07457 HXT10YFL011W 1641 nt9.8□□□□□ -0.84
BRE1Q07457 PSD1YNL169C 1503 nt9.8□□□□□ -0.84
BRE1Q07457 URA8YJR103W 1737 nt9.79□□□□□ -0.84
BRE1Q07457 SER2YGR208W 930 nt9.78□□□□□ -0.84
BRE1Q07457 YLR280CYLR280C 351 nt9.78□□□□□ -0.84
BRE1Q07457 CYT1YOR065W 930 nt9.78□□□□□ -0.84
BRE1Q07457 GPM1YKL152C 744 nt9.77□□□□□ -0.85
BRE1Q07457 GGA2YHR108W 1758 nt9.77□□□□□ -0.85
BRE1Q07457 SAM50YNL026W 1455 nt9.77□□□□□ -0.85
BRE1Q07457 THI3YDL080C 1830 nt9.77□□□□□ -0.85
BRE1Q07457 SRP102YKL154W 735 nt9.76□□□□□ -0.85
BRE1Q07457 YCP4YCR004C 744 nt9.75□□□□□ -0.85
BRE1Q07457 INH1YDL181W 258 nt9.75□□□□□ -0.85
BRE1Q07457 YFR020WYFR020W 699 nt9.75□□□□□ -0.85
BRE1Q07457 YHR218WYHR218W 1812 nt9.75□□□□□ -0.85
BRE1Q07457 ERO1YML130C 1692 nt9.74□□□□□ -0.85
BRE1Q07457 RSM7YJR113C 744 nt9.74□□□□□ -0.85
BRE1Q07457 YMR316C-BYMR316C-B 309 nt9.74□□□□□ -0.85
BRE1Q07457 NME1NME1 340 nt9.74□□□□□ -0.85
BRE1Q07457 HTS1YPR033C 1641 nt9.73□□□□□ -0.85
BRE1Q07457 tE(CUC)DtE(CUC)D 72 nt9.72□□□□□ -0.85
BRE1Q07457 tE(CUC)ItE(CUC)I 72 nt9.72□□□□□ -0.85
BRE1Q07457 AGP3YFL055W 1677 nt9.71□□□□□ -0.85
BRE1Q07457 TGA1tA(UGC)A 73 nt9.71□□□□□ -0.86
BRE1Q07457 tA(UGC)EtA(UGC)E 73 nt9.71□□□□□ -0.86
BRE1Q07457 tA(UGC)GtA(UGC)G 73 nt9.71□□□□□ -0.86
BRE1Q07457 tA(UGC)LtA(UGC)L 73 nt9.71□□□□□ -0.86
BRE1Q07457 tA(UGC)OtA(UGC)O 73 nt9.71□□□□□ -0.86
BRE1Q07457 YGR210CYGR210C 1236 nt9.7□□□□□ -0.86
BRE1Q07457 SWM1YDR260C 513 nt9.69□□□□□ -0.86
BRE1Q07457 YBL095WYBL095W 813 nt9.68□□□□□ -0.86
BRE1Q07457 NPP2YEL016C 1482 nt9.67□□□□□ -0.86
BRE1Q07457 YMC2YBR104W 990 nt9.66□□□□□ -0.86
BRE1Q07457 FCY1YPR062W 477 nt9.65□□□□□ -0.86
BRE1Q07457 YJR154WYJR154W 1041 nt9.62□□□□□ -0.87
BRE1Q07457 MRS4YKR052C 915 nt9.61□□□□□ -0.87
BRE1Q07457 YLR460CYLR460C 1131 nt9.61□□□□□ -0.87
BRE1Q07457 MAE1YKL029C 2010 nt9.6□□□□□ -0.87
BRE1Q07457 YIA6YIL006W 1122 nt9.6□□□□□ -0.87
BRE1Q07457 YMR007WYMR007W 381 nt9.6□□□□□ -0.87
BRE1Q07457 YPL108WYPL108W 507 nt9.6□□□□□ -0.87
BRE1Q07457 AAC3YBR085W 924 nt9.6□□□□□ -0.87
BRE1Q07457 YLR173WYLR173W 1827 nt9.6□□□□□ -0.87
BRE1Q07457 TMS1YDR105C 1422 nt9.57□□□□□ -0.88
BRE1Q07457 YJR149WYJR149W 1215 nt9.57□□□□□ -0.88
BRE1Q07457 AAT1YKL106W 1356 nt9.57□□□□□ -0.88
BRE1Q07457 SOD2YHR008C 702 nt9.56□□□□□ -0.88
BRE1Q07457 RIB1YBL033C 1038 nt9.56□□□□□ -0.88
BRE1Q07457 YMR166CYMR166C 1107 nt9.56□□□□□ -0.88
BRE1Q07457 LSP1YPL004C 1026 nt9.56□□□□□ -0.88
BRE1Q07457 YRF1-2YER190W 5046 nt9.55□□□□□ -0.88
BRE1Q07457 CHS7YHR142W 951 nt9.55□□□□□ -0.88
BRE1Q07457 RCR1YBR005W 642 nt9.55□□□□□ -0.88
BRE1Q07457 TPN1YGL186C 1740 nt9.55□□□□□ -0.88
BRE1Q07457 YIR035CYIR035C 765 nt9.54□□□□□ -0.88
BRE1Q07457 YJL009WYJL009W 327 nt9.54□□□□□ -0.88
BRE1Q07457 NSG2YNL156C 900 nt9.54□□□□□ -0.88
BRE1Q07457 MET22YOL064C 1074 nt9.54□□□□□ -0.88
BRE1Q07457 MTO1YGL236C 2010 nt9.53□□□□□ -0.88
BRE1Q07457 OLA1YBR025C 1185 nt9.53□□□□□ -0.88
BRE1Q07457 CAK1YFL029C 1107 nt9.52□□□□□ -0.89
BRE1Q07457 OCH1YGL038C 1443 nt9.52□□□□□ -0.89
BRE1Q07457 BUB2YMR055C 921 nt9.51□□□□□ -0.89
BRE1Q07457 YJL160CYJL160C 864 nt9.5□□□□□ -0.89
BRE1Q07457 ERG6YML008C 1152 nt9.5□□□□□ -0.89
BRE1Q07457 RNA170RNA170 169 nt9.5□□□□□ -0.89
BRE1Q07457 SNU66YOR308C 1764 nt9.48□□□□□ -0.89
BRE1Q07457 RRT14YIL127C 621 nt9.48□□□□□ -0.89
BRE1Q07457 TRP2YER090W 1524 nt9.47□□□□□ -0.89
BRE1Q07457 snR86snR86 1004 nt9.47□□□□□ -0.89
Retrieved 100 of 7,029 protein–RNA pairs in 7.8 ms