Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPCS3P61009 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
SPCS3P61009 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPCS3P61009 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SPCS3P61009 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPCS3P61009 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SPCS3P61009 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.84■□□□□ 0.93
SPCS3P61009 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPCS3P61009 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.84■□□□□ 0.93
SPCS3P61009 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SPCS3P61009 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPCS3P61009 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
SPCS3P61009 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPCS3P61009 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SPCS3P61009 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SPCS3P61009 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPCS3P61009 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SPCS3P61009 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.81■□□□□ 0.92
SPCS3P61009 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SPCS3P61009 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPCS3P61009 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPCS3P61009 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SPCS3P61009 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPCS3P61009 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SPCS3P61009 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPCS3P61009 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.79■□□□□ 0.92
SPCS3P61009 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SPCS3P61009 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPCS3P61009 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPCS3P61009 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPCS3P61009 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPCS3P61009 AP004833.2-201ENST00000532228 1454 ntBASIC20.77■□□□□ 0.92
SPCS3P61009 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.77■□□□□ 0.92
SPCS3P61009 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPCS3P61009 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.77■□□□□ 0.92
SPCS3P61009 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPCS3P61009 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SPCS3P61009 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SPCS3P61009 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.77■□□□□ 0.91
SPCS3P61009 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SPCS3P61009 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPCS3P61009 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SPCS3P61009 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPCS3P61009 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPCS3P61009 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPCS3P61009 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPCS3P61009 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPCS3P61009 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.75■□□□□ 0.91
SPCS3P61009 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.75■□□□□ 0.91
SPCS3P61009 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPCS3P61009 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPCS3P61009 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPCS3P61009 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPCS3P61009 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPCS3P61009 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPCS3P61009 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.74■□□□□ 0.91
SPCS3P61009 AL121749.1-202ENST00000609313 2153 ntBASIC20.74■□□□□ 0.91
SPCS3P61009 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SPCS3P61009 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPCS3P61009 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPCS3P61009 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.73■□□□□ 0.91
SPCS3P61009 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPCS3P61009 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.73■□□□□ 0.91
SPCS3P61009 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPCS3P61009 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPCS3P61009 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPCS3P61009 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPCS3P61009 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SPCS3P61009 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.72■□□□□ 0.91
SPCS3P61009 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPCS3P61009 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SPCS3P61009 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPCS3P61009 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.71■□□□□ 0.91
SPCS3P61009 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SPCS3P61009 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPCS3P61009 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.71■□□□□ 0.91
SPCS3P61009 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.71■□□□□ 0.91
SPCS3P61009 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPCS3P61009 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPCS3P61009 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPCS3P61009 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPCS3P61009 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPCS3P61009 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.69■□□□□ 0.9
SPCS3P61009 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPCS3P61009 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPCS3P61009 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPCS3P61009 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPCS3P61009 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SPCS3P61009 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SPCS3P61009 RARRES2P7-201ENST00000567349 469 ntBASIC20.68■□□□□ 0.9
SPCS3P61009 BX255925.1-201ENST00000566954 1854 ntBASIC20.68■□□□□ 0.9
SPCS3P61009 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SPCS3P61009 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPCS3P61009 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.67■□□□□ 0.9
SPCS3P61009 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPCS3P61009 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
SPCS3P61009 SETD8P1-201ENST00000623146 1180 ntBASIC20.66■□□□□ 0.9
SPCS3P61009 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPCS3P61009 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.66■□□□□ 0.9
SPCS3P61009 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms