Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.79■■□□□ 1.4
PER3P56645 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.78■■□□□ 1.4
PER3P56645 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PER3P56645 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PER3P56645 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PER3P56645 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PER3P56645 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PER3P56645 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.77■■□□□ 1.4
PER3P56645 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.77■■□□□ 1.4
PER3P56645 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PER3P56645 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PER3P56645 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PER3P56645 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.75■■□□□ 1.39
PER3P56645 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.75■■□□□ 1.39
PER3P56645 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.75■■□□□ 1.39
PER3P56645 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.74■■□□□ 1.39
PER3P56645 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PER3P56645 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PER3P56645 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PER3P56645 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
PER3P56645 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PER3P56645 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PER3P56645 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PER3P56645 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
PER3P56645 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
PER3P56645 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PER3P56645 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PER3P56645 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
PER3P56645 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
PER3P56645 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PER3P56645 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PER3P56645 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PER3P56645 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PER3P56645 ABCB10P3-201ENST00000561950 2166 ntBASIC23.69■■□□□ 1.38
PER3P56645 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PER3P56645 DUX4L13-201ENST00000554103 1267 ntBASIC23.69■■□□□ 1.38
PER3P56645 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.69■■□□□ 1.38
PER3P56645 DUX4L15-201ENST00000611059 1267 ntBASIC23.69■■□□□ 1.38
PER3P56645 DUX4L23-201ENST00000615195 1269 ntBASIC23.69■■□□□ 1.38
PER3P56645 DUX4L24-201ENST00000617576 1269 ntBASIC23.69■■□□□ 1.38
PER3P56645 DUX4L22-201ENST00000618238 1269 ntBASIC23.69■■□□□ 1.38
PER3P56645 DUX4L20-201ENST00000619712 1269 ntBASIC23.69■■□□□ 1.38
PER3P56645 DUX4L21-201ENST00000622058 1269 ntBASIC23.69■■□□□ 1.38
PER3P56645 DUX4L10-201ENST00000622460 1267 ntBASIC23.69■■□□□ 1.38
PER3P56645 DUX4L25-201ENST00000624915 1269 ntBASIC23.69■■□□□ 1.38
PER3P56645 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.69■■□□□ 1.38
PER3P56645 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PER3P56645 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PER3P56645 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PER3P56645 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
PER3P56645 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PER3P56645 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PER3P56645 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.67■■□□□ 1.38
PER3P56645 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PER3P56645 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
PER3P56645 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PER3P56645 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.66■■□□□ 1.38
PER3P56645 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PER3P56645 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.65■■□□□ 1.38
PER3P56645 ABCB10P1-201ENST00000614297 2181 ntBASIC23.65■■□□□ 1.38
PER3P56645 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
PER3P56645 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
PER3P56645 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.64■■□□□ 1.37
PER3P56645 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PER3P56645 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PER3P56645 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PER3P56645 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.63■■□□□ 1.37
PER3P56645 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.63■■□□□ 1.37
PER3P56645 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
PER3P56645 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.62■■□□□ 1.37
PER3P56645 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.61■■□□□ 1.37
PER3P56645 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PER3P56645 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PER3P56645 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PER3P56645 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.6■■□□□ 1.37
PER3P56645 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PER3P56645 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PER3P56645 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PER3P56645 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PER3P56645 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PER3P56645 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PER3P56645 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.6■■□□□ 1.37
PER3P56645 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PER3P56645 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PER3P56645 ABHD17AP5-201ENST00000580133 923 ntBASIC23.59■■□□□ 1.37
PER3P56645 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PER3P56645 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.59■■□□□ 1.37
PER3P56645 RARRES2P2-201ENST00000394842 485 ntBASIC23.58■■□□□ 1.37
PER3P56645 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PER3P56645 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PER3P56645 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.56■■□□□ 1.36
PER3P56645 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.56■■□□□ 1.36
PER3P56645 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PER3P56645 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PER3P56645 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PER3P56645 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
PER3P56645 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
PER3P56645 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PER3P56645 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PER3P56645 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms