Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLCNKAP51800 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CLCNKAP51800 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.52■■□□□ 1.68
CLCNKAP51800 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CLCNKAP51800 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.5■■□□□ 1.67
CLCNKAP51800 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CLCNKAP51800 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CLCNKAP51800 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CLCNKAP51800 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.49■■□□□ 1.67
CLCNKAP51800 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CLCNKAP51800 LINC00273-201ENST00000539813 1452 ntBASIC25.49■■□□□ 1.67
CLCNKAP51800 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.49■■□□□ 1.67
CLCNKAP51800 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.47■■□□□ 1.67
CLCNKAP51800 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
CLCNKAP51800 AC127502.1-201ENST00000399971 1502 ntBASIC25.47■■□□□ 1.67
CLCNKAP51800 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CLCNKAP51800 DUX4L11-201ENST00000611504 1267 ntBASIC25.45■■□□□ 1.66
CLCNKAP51800 DUX4L12-201ENST00000614593 1267 ntBASIC25.45■■□□□ 1.66
CLCNKAP51800 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.45■■□□□ 1.66
CLCNKAP51800 DUX4L14-201ENST00000621227 1267 ntBASIC25.45■■□□□ 1.66
CLCNKAP51800 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
CLCNKAP51800 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.43■■□□□ 1.66
CLCNKAP51800 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.43■■□□□ 1.66
CLCNKAP51800 ABCB10P1-201ENST00000614297 2181 ntBASIC25.43■■□□□ 1.66
CLCNKAP51800 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.42■■□□□ 1.66
CLCNKAP51800 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.42■■□□□ 1.66
CLCNKAP51800 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.42■■□□□ 1.66
CLCNKAP51800 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CLCNKAP51800 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.41■■□□□ 1.66
CLCNKAP51800 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
CLCNKAP51800 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.4■■□□□ 1.66
CLCNKAP51800 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
CLCNKAP51800 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.4■■□□□ 1.66
CLCNKAP51800 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.39■■□□□ 1.66
CLCNKAP51800 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CLCNKAP51800 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CLCNKAP51800 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CLCNKAP51800 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.39■■□□□ 1.66
CLCNKAP51800 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
CLCNKAP51800 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CLCNKAP51800 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CLCNKAP51800 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CLCNKAP51800 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.38■■□□□ 1.65
CLCNKAP51800 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.38■■□□□ 1.65
CLCNKAP51800 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CLCNKAP51800 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLCNKAP51800 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CLCNKAP51800 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLCNKAP51800 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.36■■□□□ 1.65
CLCNKAP51800 MIR3648-2-201ENST00000581792 180 ntBASIC25.36■■□□□ 1.65
CLCNKAP51800 MIR3648-1-201ENST00000615959 180 ntBASIC25.36■■□□□ 1.65
CLCNKAP51800 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CLCNKAP51800 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.36■■□□□ 1.65
CLCNKAP51800 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.35■■□□□ 1.65
CLCNKAP51800 DUX4L13-201ENST00000554103 1267 ntBASIC25.35■■□□□ 1.65
CLCNKAP51800 DUX4L15-201ENST00000611059 1267 ntBASIC25.35■■□□□ 1.65
CLCNKAP51800 DUX4L23-201ENST00000615195 1269 ntBASIC25.35■■□□□ 1.65
CLCNKAP51800 DUX4L24-201ENST00000617576 1269 ntBASIC25.35■■□□□ 1.65
CLCNKAP51800 DUX4L22-201ENST00000618238 1269 ntBASIC25.35■■□□□ 1.65
CLCNKAP51800 DUX4L20-201ENST00000619712 1269 ntBASIC25.35■■□□□ 1.65
CLCNKAP51800 DUX4L21-201ENST00000622058 1269 ntBASIC25.35■■□□□ 1.65
CLCNKAP51800 DUX4L10-201ENST00000622460 1267 ntBASIC25.35■■□□□ 1.65
CLCNKAP51800 DUX4L25-201ENST00000624915 1269 ntBASIC25.35■■□□□ 1.65
CLCNKAP51800 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CLCNKAP51800 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CLCNKAP51800 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CLCNKAP51800 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.33■■□□□ 1.65
CLCNKAP51800 HLA-V-202ENST00000446817 847 ntBASIC25.33■■□□□ 1.65
CLCNKAP51800 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.33■■□□□ 1.65
CLCNKAP51800 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.33■■□□□ 1.65
CLCNKAP51800 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
CLCNKAP51800 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CLCNKAP51800 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
CLCNKAP51800 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.32■■□□□ 1.64
CLCNKAP51800 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CLCNKAP51800 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
CLCNKAP51800 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CLCNKAP51800 CR559946.2-201ENST00000623684 991 ntBASIC25.31■■□□□ 1.64
CLCNKAP51800 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.31■■□□□ 1.64
CLCNKAP51800 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CLCNKAP51800 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.31■■□□□ 1.64
CLCNKAP51800 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CLCNKAP51800 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CLCNKAP51800 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
CLCNKAP51800 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CLCNKAP51800 AC135983.2-203ENST00000454486 1613 ntBASIC25.3■■□□□ 1.64
CLCNKAP51800 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.3■■□□□ 1.64
CLCNKAP51800 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CLCNKAP51800 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CLCNKAP51800 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CLCNKAP51800 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
CLCNKAP51800 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CLCNKAP51800 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CLCNKAP51800 MIR639-201ENST00000384974 98 ntBASIC25.28■■□□□ 1.64
CLCNKAP51800 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CLCNKAP51800 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
CLCNKAP51800 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
CLCNKAP51800 AC016575.1-201ENST00000607026 382 ntBASIC25.27■■□□□ 1.64
CLCNKAP51800 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CLCNKAP51800 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms