Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 YKR012CYKR012C 378 nt9.39□□□□□ -0.91
VPS53P47061 PCP1YGR101W 1041 nt9.38□□□□□ -0.91
VPS53P47061 ARA2YMR041C 1008 nt9.38□□□□□ -0.91
VPS53P47061 URA8YJR103W 1737 nt9.37□□□□□ -0.91
VPS53P47061 YNR064CYNR064C 873 nt9.37□□□□□ -0.91
VPS53P47061 GRH1YDR517W 1119 nt9.36□□□□□ -0.91
VPS53P47061 YHR218WYHR218W 1812 nt9.35□□□□□ -0.91
VPS53P47061 ENO1YGR254W 1314 nt9.35□□□□□ -0.91
VPS53P47061 HXK1YFR053C 1458 nt9.35□□□□□ -0.91
VPS53P47061 YLR046CYLR046C 813 nt9.35□□□□□ -0.91
VPS53P47061 ODC1YPL134C 933 nt9.35□□□□□ -0.91
VPS53P47061 ALD5YER073W 1563 nt9.34□□□□□ -0.91
VPS53P47061 YDR510C-AYDR510C-A 117 nt9.34□□□□□ -0.91
VPS53P47061 YGR210CYGR210C 1236 nt9.34□□□□□ -0.91
VPS53P47061 YLR122CYLR122C 378 nt9.34□□□□□ -0.91
VPS53P47061 YOR268CYOR268C 399 nt9.34□□□□□ -0.91
VPS53P47061 FCY1YPR062W 477 nt9.34□□□□□ -0.91
VPS53P47061 ERO1YML130C 1692 nt9.33□□□□□ -0.92
VPS53P47061 TGA1tA(UGC)A 73 nt9.33□□□□□ -0.92
VPS53P47061 tA(UGC)EtA(UGC)E 73 nt9.33□□□□□ -0.92
VPS53P47061 tA(UGC)GtA(UGC)G 73 nt9.33□□□□□ -0.92
VPS53P47061 tA(UGC)LtA(UGC)L 73 nt9.33□□□□□ -0.92
VPS53P47061 tA(UGC)OtA(UGC)O 73 nt9.33□□□□□ -0.92
VPS53P47061 SDS24YBR214W 1584 nt9.33□□□□□ -0.92
VPS53P47061 YLR280CYLR280C 351 nt9.31□□□□□ -0.92
VPS53P47061 RIM2YBR192W 1134 nt9.3□□□□□ -0.92
VPS53P47061 NAM8YHR086W 1572 nt9.29□□□□□ -0.92
VPS53P47061 GID8YMR135C 1368 nt9.29□□□□□ -0.92
VPS53P47061 KEL3YPL263C 1956 nt9.28□□□□□ -0.92
VPS53P47061 PAB1YER165W 1734 nt9.28□□□□□ -0.92
VPS53P47061 ELO1YJL196C 933 nt9.27□□□□□ -0.93
VPS53P47061 SWT21YNL187W 1074 nt9.27□□□□□ -0.93
VPS53P47061 SSL2YIL143C 2532 nt9.26□□□□□ -0.93
VPS53P47061 LCP5YER127W 1074 nt9.26□□□□□ -0.93
VPS53P47061 YPL108WYPL108W 507 nt9.26□□□□□ -0.93
VPS53P47061 DLD3YEL071W 1491 nt9.26□□□□□ -0.93
VPS53P47061 MRS6YOR370C 1812 nt9.26□□□□□ -0.93
VPS53P47061 MFG1YDL233W 1377 nt9.25□□□□□ -0.93
VPS53P47061 MRP1YDR347W 966 nt9.25□□□□□ -0.93
VPS53P47061 ITR2YOL103W 1830 nt9.24□□□□□ -0.93
VPS53P47061 EMC3YKL207W 762 nt9.24□□□□□ -0.93
VPS53P47061 VBA3YCL069W 1377 nt9.24□□□□□ -0.93
VPS53P47061 SFL1YOR140W 2301 nt9.23□□□□□ -0.93
VPS53P47061 REX2YLR059C 810 nt9.23□□□□□ -0.93
VPS53P47061 ESBP6YNL125C 2022 nt9.22□□□□□ -0.93
VPS53P47061 URH1YDR400W 1023 nt9.22□□□□□ -0.93
VPS53P47061 YKL133CYKL133C 1392 nt9.22□□□□□ -0.93
VPS53P47061 HXT10YFL011W 1641 nt9.21□□□□□ -0.93
VPS53P47061 EDC2YER035W 438 nt9.21□□□□□ -0.94
VPS53P47061 SUV3YPL029W 2214 nt9.2□□□□□ -0.94
VPS53P47061 YJL160CYJL160C 864 nt9.2□□□□□ -0.94
VPS53P47061 snR31snR31 225 nt9.19□□□□□ -0.94
VPS53P47061 MAS1YLR163C 1389 nt9.19□□□□□ -0.94
VPS53P47061 YMR265CYMR265C 1386 nt9.19□□□□□ -0.94
VPS53P47061 MET1YKR069W 1782 nt9.19□□□□□ -0.94
VPS53P47061 YOR072WYOR072W 315 nt9.18□□□□□ -0.94
VPS53P47061 HAP5YOR358W 729 nt9.18□□□□□ -0.94
VPS53P47061 YMR210WYMR210W 1350 nt9.17□□□□□ -0.94
VPS53P47061 MDM35YKL053C-A 261 nt9.17□□□□□ -0.94
VPS53P47061 VMA11YPL234C 495 nt9.17□□□□□ -0.94
VPS53P47061 YHR219WYHR219W 1875 nt9.16□□□□□ -0.94
VPS53P47061 TOS1YBR162C 1368 nt9.15□□□□□ -0.94
VPS53P47061 RPN14YGL004C 1254 nt9.15□□□□□ -0.94
VPS53P47061 SRP54YPR088C 1626 nt9.14□□□□□ -0.95
VPS53P47061 AI5_BETAQ0075 1065 nt9.14□□□□□ -0.95
VPS53P47061 TOM20YGR082W 552 nt9.14□□□□□ -0.95
VPS53P47061 YKL053WYKL053W 375 nt9.14□□□□□ -0.95
VPS53P47061 YPT11YNL304W 1254 nt9.14□□□□□ -0.95
VPS53P47061 GDH1YOR375C 1365 nt9.13□□□□□ -0.95
VPS53P47061 HOG1YLR113W 1308 nt9.13□□□□□ -0.95
VPS53P47061 ILV2YMR108W 2064 nt9.13□□□□□ -0.95
VPS53P47061 YFR020WYFR020W 699 nt9.13□□□□□ -0.95
VPS53P47061 CRC1YOR100C 984 nt9.13□□□□□ -0.95
VPS53P47061 LSR1LSR1 1175 nt9.12□□□□□ -0.95
VPS53P47061 YMR166CYMR166C 1107 nt9.1□□□□□ -0.95
VPS53P47061 MEX67YPL169C 1800 nt9.1□□□□□ -0.95
VPS53P47061 BUR6YER159C 429 nt9.09□□□□□ -0.95
VPS53P47061 tL(UAA)B1tL(UAA)B1 84 nt9.09□□□□□ -0.95
VPS53P47061 tL(UAA)B2tL(UAA)B2 84 nt9.09□□□□□ -0.95
VPS53P47061 tL(UAA)DtL(UAA)D 84 nt9.09□□□□□ -0.95
VPS53P47061 SUP51tL(UAA)J 84 nt9.09□□□□□ -0.95
VPS53P47061 tL(UAA)KtL(UAA)K 84 nt9.09□□□□□ -0.95
VPS53P47061 tL(UAA)LtL(UAA)L 84 nt9.09□□□□□ -0.95
VPS53P47061 tL(UAA)NtL(UAA)N 84 nt9.09□□□□□ -0.95
VPS53P47061 MFT1YML062C 1179 nt9.09□□□□□ -0.95
VPS53P47061 LSP1YPL004C 1026 nt9.09□□□□□ -0.95
VPS53P47061 SAN1YDR143C 1833 nt9.09□□□□□ -0.95
VPS53P47061 RSM7YJR113C 744 nt9.08□□□□□ -0.96
VPS53P47061 YMR206WYMR206W 942 nt9.08□□□□□ -0.96
VPS53P47061 SNX3YOR357C 489 nt9.08□□□□□ -0.96
VPS53P47061 MCM5YLR274W 2328 nt9.08□□□□□ -0.96
VPS53P47061 RPD3YNL330C 1302 nt9.06□□□□□ -0.96
VPS53P47061 NBA1YOL070C 1506 nt9.06□□□□□ -0.96
VPS53P47061 YPL041CYPL041C 624 nt9.06□□□□□ -0.96
VPS53P47061 AGP3YFL055W 1677 nt9.06□□□□□ -0.96
VPS53P47061 ADA2YDR448W 1305 nt9.05□□□□□ -0.96
VPS53P47061 TAD2YJL035C 753 nt9.05□□□□□ -0.96
VPS53P47061 CWP2YKL096W-A 279 nt9.05□□□□□ -0.96
VPS53P47061 DTR1YBR180W 1719 nt9.05□□□□□ -0.96
VPS53P47061 MDL2YPL270W 2322 nt9.04□□□□□ -0.96
Retrieved 100 of 7,029 protein–RNA pairs in 8.7 ms