Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 YRF1-1YDR545W 5391 nt6.78□□□□□ -1.32
CDC40P40968 YRF1-5YLR467W 5391 nt6.78□□□□□ -1.32
CDC40P40968 YRF1-8YOR396W 5391 nt6.78□□□□□ -1.32
CDC40P40968 SAC7YDR389W 1965 nt6.78□□□□□ -1.32
CDC40P40968 LOT5YKL183W 921 nt6.77□□□□□ -1.33
CDC40P40968 YMR265CYMR265C 1386 nt6.77□□□□□ -1.33
CDC40P40968 YLR072WYLR072W 2082 nt6.77□□□□□ -1.33
CDC40P40968 FRT1YOR324C 1809 nt6.76□□□□□ -1.33
CDC40P40968 PMA2YPL036W 2844 nt6.76□□□□□ -1.33
CDC40P40968 RAS2YNL098C 969 nt6.76□□□□□ -1.33
CDC40P40968 NME1NME1 340 nt6.76□□□□□ -1.33
CDC40P40968 YPL222C-AYPL222C-A 246 nt6.76□□□□□ -1.33
CDC40P40968 FCY21YER060W 1587 nt6.76□□□□□ -1.33
CDC40P40968 PRC1YMR297W 1599 nt6.76□□□□□ -1.33
CDC40P40968 MET8YBR213W 825 nt6.75□□□□□ -1.33
CDC40P40968 TOP3YLR234W 1971 nt6.75□□□□□ -1.33
CDC40P40968 ERG13YML126C 1476 nt6.74□□□□□ -1.33
CDC40P40968 GGC1YDL198C 903 nt6.74□□□□□ -1.33
CDC40P40968 GPM1YKL152C 744 nt6.74□□□□□ -1.33
CDC40P40968 PMT7YDR307W 1989 nt6.74□□□□□ -1.33
CDC40P40968 RIB3YDR487C 627 nt6.73□□□□□ -1.33
CDC40P40968 ELO1YJL196C 933 nt6.73□□□□□ -1.33
CDC40P40968 YEN1YER041W 2280 nt6.73□□□□□ -1.33
CDC40P40968 DAL7YIR031C 1665 nt6.72□□□□□ -1.33
CDC40P40968 HAP5YOR358W 729 nt6.71□□□□□ -1.34
CDC40P40968 CRN1YLR429W 1956 nt6.7□□□□□ -1.34
CDC40P40968 ATP10YLR393W 840 nt6.7□□□□□ -1.34
CDC40P40968 YMC2YBR104W 990 nt6.7□□□□□ -1.34
CDC40P40968 SUV3YPL029W 2214 nt6.7□□□□□ -1.34
CDC40P40968 HAL5YJL165C 2568 nt6.69□□□□□ -1.34
CDC40P40968 BEM1YBR200W 1656 nt6.69□□□□□ -1.34
CDC40P40968 CSM1YCR086W 573 nt6.69□□□□□ -1.34
CDC40P40968 NUC1YJL208C 990 nt6.69□□□□□ -1.34
CDC40P40968 LEA1YPL213W 717 nt6.69□□□□□ -1.34
CDC40P40968 HDA1YNL021W 2121 nt6.68□□□□□ -1.34
CDC40P40968 NDE1YMR145C 1683 nt6.68□□□□□ -1.34
CDC40P40968 SPE4YLR146C 903 nt6.68□□□□□ -1.34
CDC40P40968 EAF3YPR023C 1206 nt6.68□□□□□ -1.34
CDC40P40968 SMC5YOL034W 3282 nt6.68□□□□□ -1.34
CDC40P40968 CTF3YLR381W 2202 nt6.68□□□□□ -1.34
CDC40P40968 RPN14YGL004C 1254 nt6.67□□□□□ -1.34
CDC40P40968 YLR437C-AYLR437C-A 228 nt6.67□□□□□ -1.34
CDC40P40968 SMM1YNR015W 1155 nt6.67□□□□□ -1.34
CDC40P40968 BAP3YDR046C 1815 nt6.66□□□□□ -1.34
CDC40P40968 PRY1YJL079C 900 nt6.66□□□□□ -1.34
CDC40P40968 YPL264CYPL264C 1062 nt6.66□□□□□ -1.34
CDC40P40968 HEL1YKR017C 1656 nt6.65□□□□□ -1.34
CDC40P40968 ERG6YML008C 1152 nt6.65□□□□□ -1.34
CDC40P40968 YKR023WYKR023W 1593 nt6.65□□□□□ -1.35
CDC40P40968 SAM3YPL274W 1764 nt6.64□□□□□ -1.35
CDC40P40968 THI3YDL080C 1830 nt6.64□□□□□ -1.35
CDC40P40968 YMR253CYMR253C 1245 nt6.64□□□□□ -1.35
CDC40P40968 YNR064CYNR064C 873 nt6.64□□□□□ -1.35
CDC40P40968 ABP1YCR088W 1779 nt6.64□□□□□ -1.35
CDC40P40968 CAB5YDR196C 726 nt6.63□□□□□ -1.35
CDC40P40968 OYE2YHR179W 1203 nt6.63□□□□□ -1.35
CDC40P40968 ERR3YMR323W 1314 nt6.63□□□□□ -1.35
CDC40P40968 CMK2YOL016C 1344 nt6.63□□□□□ -1.35
CDC40P40968 CIR2YOR356W 1896 nt6.63□□□□□ -1.35
CDC40P40968 ERR1YOR393W 1314 nt6.63□□□□□ -1.35
CDC40P40968 ERR2YPL281C 1314 nt6.63□□□□□ -1.35
CDC40P40968 DDI1YER143W 1287 nt6.62□□□□□ -1.35
CDC40P40968 CRC1YOR100C 984 nt6.62□□□□□ -1.35
CDC40P40968 AFG2YLR397C 2343 nt6.61□□□□□ -1.35
CDC40P40968 BIM1YER016W 1035 nt6.61□□□□□ -1.35
CDC40P40968 ESS1YJR017C 513 nt6.61□□□□□ -1.35
CDC40P40968 YER152CYER152C 1332 nt6.6□□□□□ -1.35
CDC40P40968 RPT5YOR117W 1305 nt6.6□□□□□ -1.35
CDC40P40968 snR86snR86 1004 nt6.6□□□□□ -1.35
CDC40P40968 YEL034C-AYEL034C-A 603 nt6.6□□□□□ -1.35
CDC40P40968 YPI1YFR003C 468 nt6.6□□□□□ -1.35
CDC40P40968 KEL3YPL263C 1956 nt6.6□□□□□ -1.35
CDC40P40968 HXT9YJL219W 1704 nt6.59□□□□□ -1.35
CDC40P40968 MRS4YKR052C 915 nt6.59□□□□□ -1.35
CDC40P40968 ATO2YNR002C 849 nt6.59□□□□□ -1.35
CDC40P40968 GGA2YHR108W 1758 nt6.59□□□□□ -1.35
CDC40P40968 YIL108WYIL108W 2091 nt6.57□□□□□ -1.36
CDC40P40968 LSB3YFR024C-A 1380 nt6.57□□□□□ -1.36
CDC40P40968 SGV1YPR161C 1974 nt6.57□□□□□ -1.36
CDC40P40968 YMR316C-BYMR316C-B 309 nt6.57□□□□□ -1.36
CDC40P40968 TPS1YBR126C 1488 nt6.57□□□□□ -1.36
CDC40P40968 YOS9YDR057W 1629 nt6.57□□□□□ -1.36
CDC40P40968 WSC4YHL028W 1818 nt6.56□□□□□ -1.36
CDC40P40968 VRG4YGL225W 1014 nt6.56□□□□□ -1.36
CDC40P40968 YJL118WYJL118W 660 nt6.56□□□□□ -1.36
CDC40P40968 RRT8YOL048C 1029 nt6.56□□□□□ -1.36
CDC40P40968 HIS3YOR202W 663 nt6.56□□□□□ -1.36
CDC40P40968 AQR1YNL065W 1761 nt6.56□□□□□ -1.36
CDC40P40968 KGD2YDR148C 1392 nt6.56□□□□□ -1.36
CDC40P40968 SAM50YNL026W 1455 nt6.54□□□□□ -1.36
CDC40P40968 MAS2YHR024C 1449 nt6.54□□□□□ -1.36
CDC40P40968 YJL055WYJL055W 738 nt6.54□□□□□ -1.36
CDC40P40968 TMA23YMR269W 636 nt6.54□□□□□ -1.36
CDC40P40968 NDE2YDL085W 1638 nt6.54□□□□□ -1.36
CDC40P40968 ASN2YGR124W 1719 nt6.53□□□□□ -1.36
CDC40P40968 RRT6YGL146C 936 nt6.53□□□□□ -1.36
CDC40P40968 snR31snR31 225 nt6.53□□□□□ -1.36
CDC40P40968 RIB7YBR153W 735 nt6.53□□□□□ -1.36
CDC40P40968 YJR114WYJR114W 393 nt6.52□□□□□ -1.37
CDC40P40968 DPH5YLR172C 903 nt6.52□□□□□ -1.37
Retrieved 100 of 7,029 protein–RNA pairs in 19.3 ms