Protein–RNA interactions for Protein: P39875

EXO1, Exodeoxyribonuclease 1, yeastyeast

Predictions only

Length 702 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
EXO1P39875 REX2YLR059C 810 nt8.45□□□□□ -1.06
EXO1P39875 YLR280CYLR280C 351 nt8.45□□□□□ -1.06
EXO1P39875 GID8YMR135C 1368 nt8.45□□□□□ -1.06
EXO1P39875 TGA1tA(UGC)A 73 nt8.44□□□□□ -1.06
EXO1P39875 tA(UGC)EtA(UGC)E 73 nt8.44□□□□□ -1.06
EXO1P39875 tA(UGC)GtA(UGC)G 73 nt8.44□□□□□ -1.06
EXO1P39875 tA(UGC)LtA(UGC)L 73 nt8.44□□□□□ -1.06
EXO1P39875 tA(UGC)OtA(UGC)O 73 nt8.44□□□□□ -1.06
EXO1P39875 YKL053WYKL053W 375 nt8.44□□□□□ -1.06
EXO1P39875 ERO1YML130C 1692 nt8.43□□□□□ -1.06
EXO1P39875 RPN14YGL004C 1254 nt8.43□□□□□ -1.06
EXO1P39875 YGR139WYGR139W 339 nt8.43□□□□□ -1.06
EXO1P39875 YGR210CYGR210C 1236 nt8.43□□□□□ -1.06
EXO1P39875 HAP5YOR358W 729 nt8.43□□□□□ -1.06
EXO1P39875 FCY1YPR062W 477 nt8.43□□□□□ -1.06
EXO1P39875 SUV3YPL029W 2214 nt8.43□□□□□ -1.06
EXO1P39875 VBA3YCL069W 1377 nt8.43□□□□□ -1.06
EXO1P39875 YMR265CYMR265C 1386 nt8.43□□□□□ -1.06
EXO1P39875 SRP54YPR088C 1626 nt8.42□□□□□ -1.06
EXO1P39875 VMA11YPL234C 495 nt8.41□□□□□ -1.06
EXO1P39875 BUD20YLR074C 501 nt8.4□□□□□ -1.06
EXO1P39875 YHR219WYHR219W 1875 nt8.4□□□□□ -1.07
EXO1P39875 YRF1-2YER190W 5046 nt8.39□□□□□ -1.07
EXO1P39875 LSR1LSR1 1175 nt8.39□□□□□ -1.07
EXO1P39875 CRC1YOR100C 984 nt8.39□□□□□ -1.07
EXO1P39875 MRS6YOR370C 1812 nt8.38□□□□□ -1.07
EXO1P39875 YKL133CYKL133C 1392 nt8.38□□□□□ -1.07
EXO1P39875 SSL2YIL143C 2532 nt8.37□□□□□ -1.07
EXO1P39875 YHR218WYHR218W 1812 nt8.36□□□□□ -1.07
EXO1P39875 SNX3YOR357C 489 nt8.36□□□□□ -1.07
EXO1P39875 FRE6YLL051C 2139 nt8.36□□□□□ -1.07
EXO1P39875 YPT11YNL304W 1254 nt8.35□□□□□ -1.07
EXO1P39875 YOR072WYOR072W 315 nt8.35□□□□□ -1.07
EXO1P39875 CWP2YKL096W-A 279 nt8.34□□□□□ -1.07
EXO1P39875 RPD3YNL330C 1302 nt8.33□□□□□ -1.08
EXO1P39875 YPL108WYPL108W 507 nt8.33□□□□□ -1.08
EXO1P39875 ODC1YPL134C 933 nt8.33□□□□□ -1.08
EXO1P39875 SAN1YDR143C 1833 nt8.33□□□□□ -1.08
EXO1P39875 YFR020WYFR020W 699 nt8.32□□□□□ -1.08
EXO1P39875 RIM2YBR192W 1134 nt8.32□□□□□ -1.08
EXO1P39875 KGD2YDR148C 1392 nt8.31□□□□□ -1.08
EXO1P39875 GRH1YDR517W 1119 nt8.29□□□□□ -1.08
EXO1P39875 RSM7YJR113C 744 nt8.29□□□□□ -1.08
EXO1P39875 EMC3YKL207W 762 nt8.28□□□□□ -1.08
EXO1P39875 YOR343CYOR343C 327 nt8.28□□□□□ -1.08
EXO1P39875 PAU21YOR394W 495 nt8.28□□□□□ -1.08
EXO1P39875 PAU22YPL282C 495 nt8.28□□□□□ -1.08
EXO1P39875 PTC6YCR079W 1329 nt8.28□□□□□ -1.08
EXO1P39875 GAS1YMR307W 1680 nt8.27□□□□□ -1.08
EXO1P39875 YJL160CYJL160C 864 nt8.27□□□□□ -1.09
EXO1P39875 HRA1HRA1 564 nt8.27□□□□□ -1.09
EXO1P39875 LSP1YPL004C 1026 nt8.27□□□□□ -1.09
EXO1P39875 SBP1YHL034C 885 nt8.26□□□□□ -1.09
EXO1P39875 YMR210WYMR210W 1350 nt8.24□□□□□ -1.09
EXO1P39875 MDM35YKL053C-A 261 nt8.24□□□□□ -1.09
EXO1P39875 YMR166CYMR166C 1107 nt8.24□□□□□ -1.09
EXO1P39875 HXT10YFL011W 1641 nt8.23□□□□□ -1.09
EXO1P39875 MEX67YPL169C 1800 nt8.23□□□□□ -1.09
EXO1P39875 KRR1YCL059C 951 nt8.22□□□□□ -1.09
EXO1P39875 RPL12BYDR418W 498 nt8.22□□□□□ -1.09
EXO1P39875 YAL016C-AYAL016C-A 315 nt8.22□□□□□ -1.09
EXO1P39875 YLR460CYLR460C 1131 nt8.21□□□□□ -1.1
EXO1P39875 RPC31YNL151C 756 nt8.2□□□□□ -1.1
EXO1P39875 ESBP6YNL125C 2022 nt8.2□□□□□ -1.1
EXO1P39875 BSP1YPR171W 1731 nt8.2□□□□□ -1.1
EXO1P39875 GTB1YDR221W 2109 nt8.18□□□□□ -1.1
EXO1P39875 MRP1YDR347W 966 nt8.18□□□□□ -1.1
EXO1P39875 MDL2YPL270W 2322 nt8.18□□□□□ -1.1
EXO1P39875 PET18YCR020C 648 nt8.17□□□□□ -1.1
EXO1P39875 MTO1YGL236C 2010 nt8.16□□□□□ -1.1
EXO1P39875 RRT14YIL127C 621 nt8.16□□□□□ -1.1
EXO1P39875 MFT1YML062C 1179 nt8.16□□□□□ -1.1
EXO1P39875 DPL1YDR294C 1770 nt8.15□□□□□ -1.1
EXO1P39875 CAK1YFL029C 1107 nt8.15□□□□□ -1.1
EXO1P39875 CHS7YHR142W 951 nt8.15□□□□□ -1.1
EXO1P39875 GGA2YHR108W 1758 nt8.14□□□□□ -1.11
EXO1P39875 ILV2YMR108W 2064 nt8.14□□□□□ -1.11
EXO1P39875 GDH1YOR375C 1365 nt8.13□□□□□ -1.11
EXO1P39875 OCH1YGL038C 1443 nt8.12□□□□□ -1.11
EXO1P39875 MET22YOL064C 1074 nt8.12□□□□□ -1.11
EXO1P39875 OLA1YBR025C 1185 nt8.12□□□□□ -1.11
EXO1P39875 NBA1YOL070C 1506 nt8.12□□□□□ -1.11
EXO1P39875 UTR5YEL035C 501 nt8.11□□□□□ -1.11
EXO1P39875 ADA2YDR448W 1305 nt8.1□□□□□ -1.11
EXO1P39875 THI3YDL080C 1830 nt8.09□□□□□ -1.11
EXO1P39875 YMR316C-BYMR316C-B 309 nt8.09□□□□□ -1.11
EXO1P39875 YOR268CYOR268C 399 nt8.09□□□□□ -1.11
EXO1P39875 GAL2YLR081W 1725 nt8.09□□□□□ -1.11
EXO1P39875 DTR1YBR180W 1719 nt8.09□□□□□ -1.11
EXO1P39875 YPR084WYPR084W 1371 nt8.09□□□□□ -1.12
EXO1P39875 tL(UAA)B1tL(UAA)B1 84 nt8.08□□□□□ -1.12
EXO1P39875 tL(UAA)B2tL(UAA)B2 84 nt8.08□□□□□ -1.12
EXO1P39875 tL(UAA)DtL(UAA)D 84 nt8.08□□□□□ -1.12
EXO1P39875 SUP51tL(UAA)J 84 nt8.08□□□□□ -1.12
EXO1P39875 tL(UAA)KtL(UAA)K 84 nt8.08□□□□□ -1.12
EXO1P39875 tL(UAA)LtL(UAA)L 84 nt8.08□□□□□ -1.12
EXO1P39875 tL(UAA)NtL(UAA)N 84 nt8.08□□□□□ -1.12
EXO1P39875 GPM1YKL152C 744 nt8.08□□□□□ -1.12
EXO1P39875 MET8YBR213W 825 nt8.08□□□□□ -1.12
EXO1P39875 YDR467CYDR467C 327 nt8.07□□□□□ -1.12
Retrieved 100 of 7,029 protein–RNA pairs in 20.8 ms