Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
KCNA3P22001 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC32.74■■■□□ 2.83
KCNA3P22001 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC32.74■■■□□ 2.83
KCNA3P22001 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC32.74■■■□□ 2.83
KCNA3P22001 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
KCNA3P22001 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
KCNA3P22001 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
KCNA3P22001 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
KCNA3P22001 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
KCNA3P22001 AC008813.1-201ENST00000536597 885 ntBASIC32.72■■■□□ 2.83
KCNA3P22001 AL033527.3-201ENST00000566366 1196 ntBASIC32.72■■■□□ 2.83
KCNA3P22001 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
KCNA3P22001 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC32.71■■■□□ 2.83
KCNA3P22001 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
KCNA3P22001 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC32.71■■■□□ 2.83
KCNA3P22001 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
KCNA3P22001 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
KCNA3P22001 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC32.71■■■□□ 2.83
KCNA3P22001 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC32.71■■■□□ 2.83
KCNA3P22001 LINC00273-201ENST00000539813 1452 ntBASIC32.7■■■□□ 2.83
KCNA3P22001 AC018358.1-201ENST00000631079 1402 ntBASIC32.69■■■□□ 2.82
KCNA3P22001 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
KCNA3P22001 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC32.68■■■□□ 2.82
KCNA3P22001 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC32.68■■■□□ 2.82
KCNA3P22001 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
KCNA3P22001 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC32.68■■■□□ 2.82
KCNA3P22001 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
KCNA3P22001 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
KCNA3P22001 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC32.65■■■□□ 2.82
KCNA3P22001 HES4-202ENST00000428771 1040 ntTSL 2 BASIC32.64■■■□□ 2.82
KCNA3P22001 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC32.64■■■□□ 2.82
KCNA3P22001 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC32.64■■■□□ 2.82
KCNA3P22001 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
KCNA3P22001 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC32.63■■■□□ 2.81
KCNA3P22001 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC32.63■■■□□ 2.81
KCNA3P22001 U85056.1-201ENST00000616429 682 ntBASIC32.62■■■□□ 2.81
KCNA3P22001 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
KCNA3P22001 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
KCNA3P22001 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC32.59■■■□□ 2.81
KCNA3P22001 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC32.59■■■□□ 2.81
KCNA3P22001 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
KCNA3P22001 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC32.58■■■□□ 2.81
KCNA3P22001 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC32.58■■■□□ 2.81
KCNA3P22001 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.58■■■□□ 2.81
KCNA3P22001 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
KCNA3P22001 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
KCNA3P22001 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
KCNA3P22001 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
KCNA3P22001 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
KCNA3P22001 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
KCNA3P22001 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
KCNA3P22001 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC32.52■■■□□ 2.8
KCNA3P22001 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC32.52■■■□□ 2.8
KCNA3P22001 GFER-205ENST00000569451 517 ntTSL 5 BASIC32.52■■■□□ 2.8
KCNA3P22001 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC32.52■■■□□ 2.8
KCNA3P22001 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
KCNA3P22001 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
KCNA3P22001 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC32.51■■■□□ 2.79
KCNA3P22001 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
KCNA3P22001 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC32.5■■■□□ 2.79
KCNA3P22001 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC32.5■■■□□ 2.79
KCNA3P22001 HYI-213ENST00000583037 1322 ntTSL 5 BASIC32.5■■■□□ 2.79
KCNA3P22001 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC32.49■■■□□ 2.79
KCNA3P22001 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC32.49■■■□□ 2.79
KCNA3P22001 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
KCNA3P22001 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
KCNA3P22001 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
KCNA3P22001 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
KCNA3P22001 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC32.46■■■□□ 2.79
KCNA3P22001 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
KCNA3P22001 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
KCNA3P22001 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
KCNA3P22001 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.79
KCNA3P22001 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC32.45■■■□□ 2.79
KCNA3P22001 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
KCNA3P22001 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC32.45■■■□□ 2.79
KCNA3P22001 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC32.45■■■□□ 2.78
KCNA3P22001 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
KCNA3P22001 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC32.44■■■□□ 2.78
KCNA3P22001 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
KCNA3P22001 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
KCNA3P22001 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.42■■■□□ 2.78
KCNA3P22001 AC120057.4-201ENST00000624722 1615 ntBASIC32.42■■■□□ 2.78
KCNA3P22001 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC32.42■■■□□ 2.78
KCNA3P22001 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
KCNA3P22001 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
KCNA3P22001 TSPY13P-201ENST00000338964 914 ntBASIC32.4■■■□□ 2.78
KCNA3P22001 AC004987.1-201ENST00000428627 508 ntBASIC32.4■■■□□ 2.78
KCNA3P22001 KRT18P60-201ENST00000312876 1297 ntBASIC32.39■■■□□ 2.78
KCNA3P22001 RARRES2P1-201ENST00000474487 481 ntBASIC32.39■■■□□ 2.78
KCNA3P22001 AC060814.1-201ENST00000554326 538 ntBASIC32.39■■■□□ 2.78
KCNA3P22001 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
KCNA3P22001 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC32.38■■■□□ 2.77
KCNA3P22001 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
KCNA3P22001 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
KCNA3P22001 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
KCNA3P22001 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC32.37■■■□□ 2.77
KCNA3P22001 CHST11-203ENST00000547956 936 ntTSL 2 BASIC32.37■■■□□ 2.77
KCNA3P22001 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC32.36■■■□□ 2.77
KCNA3P22001 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC32.36■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms