Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 YGR066CYGR066C 879 nt9.06□□□□□ -0.96
TY1A-PR2P0CX60 IBD2YNL164C 1056 nt9.06□□□□□ -0.96
TY1A-PR2P0CX60 YDL129WYDL129W 876 nt9.05□□□□□ -0.96
TY1A-PR2P0CX60 YJR096WYJR096W 849 nt9.05□□□□□ -0.96
TY1A-PR2P0CX60 CWP1YKL096W 720 nt9.05□□□□□ -0.96
TY1A-PR2P0CX60 MRPL23YOR150W 492 nt9.05□□□□□ -0.96
TY1A-PR2P0CX60 DCI1YOR180C 816 nt9.05□□□□□ -0.96
TY1A-PR2P0CX60 COX11YPL132W 903 nt9.05□□□□□ -0.96
TY1A-PR2P0CX60 DIT1YDR403W 1611 nt9.05□□□□□ -0.96
TY1A-PR2P0CX60 CMK1YFR014C 1341 nt9.05□□□□□ -0.96
TY1A-PR2P0CX60 SPC42YKL042W 1092 nt9.04□□□□□ -0.96
TY1A-PR2P0CX60 ATG19YOL082W 1248 nt9.04□□□□□ -0.96
TY1A-PR2P0CX60 SET6YPL165C 1122 nt9.04□□□□□ -0.96
TY1A-PR2P0CX60 DCD1YHR144C 939 nt9.03□□□□□ -0.96
TY1A-PR2P0CX60 MRPL32YCR003W 552 nt9.02□□□□□ -0.97
TY1A-PR2P0CX60 YDL241WYDL241W 372 nt9.02□□□□□ -0.97
TY1A-PR2P0CX60 YML101C-AYML101C-A 318 nt9.02□□□□□ -0.97
TY1A-PR2P0CX60 ECM2YBR065C 1095 nt9.02□□□□□ -0.97
TY1A-PR2P0CX60 TSC10YBR265W 963 nt9.02□□□□□ -0.97
TY1A-PR2P0CX60 NDI1YML120C 1542 nt9.01□□□□□ -0.97
TY1A-PR2P0CX60 YKR075CYKR075C 924 nt9□□□□□ -0.97
TY1A-PR2P0CX60 YLL053CYLL053C 459 nt9□□□□□ -0.97
TY1A-PR2P0CX60 YLR366WYLR366W 306 nt9□□□□□ -0.97
TY1A-PR2P0CX60 THI80YOR143C 960 nt9□□□□□ -0.97
TY1A-PR2P0CX60 MDM10YAL010C 1482 nt9□□□□□ -0.97
TY1A-PR2P0CX60 EHD3YDR036C 1503 nt9□□□□□ -0.97
TY1A-PR2P0CX60 SMF3YLR034C 1422 nt8.99□□□□□ -0.97
TY1A-PR2P0CX60 PEX7YDR142C 1128 nt8.99□□□□□ -0.97
TY1A-PR2P0CX60 MRP1YDR347W 966 nt8.99□□□□□ -0.97
TY1A-PR2P0CX60 OXA1YER154W 1209 nt8.99□□□□□ -0.97
TY1A-PR2P0CX60 SNF7YLR025W 723 nt8.99□□□□□ -0.97
TY1A-PR2P0CX60 CDS1YBR029C 1374 nt8.99□□□□□ -0.97
TY1A-PR2P0CX60 YCL074WYCL074W 927 nt8.98□□□□□ -0.97
TY1A-PR2P0CX60 YIH1YCR059C 777 nt8.98□□□□□ -0.97
TY1A-PR2P0CX60 DIN7YDR263C 1293 nt8.98□□□□□ -0.97
TY1A-PR2P0CX60 HVG1YER039C 750 nt8.98□□□□□ -0.97
TY1A-PR2P0CX60 MSP1YGR028W 1089 nt8.98□□□□□ -0.97
TY1A-PR2P0CX60 YHR140WYHR140W 720 nt8.98□□□□□ -0.97
TY1A-PR2P0CX60 AIM23YJL131C 1071 nt8.98□□□□□ -0.97
TY1A-PR2P0CX60 VTA1YLR181C 993 nt8.98□□□□□ -0.97
TY1A-PR2P0CX60 SLI1YGR212W 1407 nt8.97□□□□□ -0.97
TY1A-PR2P0CX60 SHR3YDL212W 633 nt8.97□□□□□ -0.97
TY1A-PR2P0CX60 AVO2YMR068W 1281 nt8.97□□□□□ -0.97
TY1A-PR2P0CX60 YBR134WYBR134W 402 nt8.97□□□□□ -0.97
TY1A-PR2P0CX60 YNL115CYNL115C 1935 nt8.96□□□□□ -0.97
TY1A-PR2P0CX60 ADH4YGL256W 1149 nt8.96□□□□□ -0.98
TY1A-PR2P0CX60 CTL1YMR180C 963 nt8.96□□□□□ -0.98
TY1A-PR2P0CX60 YPL277CYPL277C 1464 nt8.96□□□□□ -0.98
TY1A-PR2P0CX60 GET3YDL100C 1065 nt8.95□□□□□ -0.98
TY1A-PR2P0CX60 NBP2YDR162C 711 nt8.95□□□□□ -0.98
TY1A-PR2P0CX60 MTR2YKL186C 555 nt8.95□□□□□ -0.98
TY1A-PR2P0CX60 HCR1YLR192C 798 nt8.95□□□□□ -0.98
TY1A-PR2P0CX60 YMR187CYMR187C 1296 nt8.95□□□□□ -0.98
TY1A-PR2P0CX60 RUF5-1RUF5-1 710 nt8.95□□□□□ -0.98
TY1A-PR2P0CX60 RUF5-2RUF5-2 710 nt8.95□□□□□ -0.98
TY1A-PR2P0CX60 ARG7YMR062C 1326 nt8.95□□□□□ -0.98
TY1A-PR2P0CX60 HER2YMR293C 1395 nt8.95□□□□□ -0.98
TY1A-PR2P0CX60 PUS7YOR243C 2031 nt8.95□□□□□ -0.98
TY1A-PR2P0CX60 SPT20YOL148C 1815 nt8.94□□□□□ -0.98
TY1A-PR2P0CX60 WHI4YDL224C 1950 nt8.94□□□□□ -0.98
TY1A-PR2P0CX60 YIR021W-AYIR021W-A 213 nt8.94□□□□□ -0.98
TY1A-PR2P0CX60 CSM3YMR048W 954 nt8.94□□□□□ -0.98
TY1A-PR2P0CX60 PFA4YOL003C 1137 nt8.94□□□□□ -0.98
TY1A-PR2P0CX60 GBP2YCL011C 1284 nt8.94□□□□□ -0.98
TY1A-PR2P0CX60 PCI8YIL071C 1335 nt8.94□□□□□ -0.98
TY1A-PR2P0CX60 YFR057WYFR057W 456 nt8.93□□□□□ -0.98
TY1A-PR2P0CX60 GEP7YGL057C 864 nt8.93□□□□□ -0.98
TY1A-PR2P0CX60 PEF1YGR058W 1008 nt8.93□□□□□ -0.98
TY1A-PR2P0CX60 SRT1YMR101C 1032 nt8.93□□□□□ -0.98
TY1A-PR2P0CX60 TCD2YKL027W 1344 nt8.93□□□□□ -0.98
TY1A-PR2P0CX60 RPC82YPR190C 1965 nt8.93□□□□□ -0.98
TY1A-PR2P0CX60 RDN18-1RDN18-1 1800 nt8.92□□□□□ -0.98
TY1A-PR2P0CX60 RDN18-2RDN18-2 1800 nt8.92□□□□□ -0.98
TY1A-PR2P0CX60 LST7YGR057C 729 nt8.92□□□□□ -0.98
TY1A-PR2P0CX60 SLD7YOR060C 774 nt8.92□□□□□ -0.98
TY1A-PR2P0CX60 MAS1YLR163C 1389 nt8.91□□□□□ -0.98
TY1A-PR2P0CX60 CLP1YOR250C 1338 nt8.91□□□□□ -0.98
TY1A-PR2P0CX60 PBP2YBR233W 1242 nt8.91□□□□□ -0.98
TY1A-PR2P0CX60 MUM3YOR298W 1440 nt8.9□□□□□ -0.98
TY1A-PR2P0CX60 IMP2'YIL154C 1041 nt8.9□□□□□ -0.98
TY1A-PR2P0CX60 DCG1YIR030C 735 nt8.9□□□□□ -0.98
TY1A-PR2P0CX60 YLR281CYLR281C 468 nt8.9□□□□□ -0.98
TY1A-PR2P0CX60 GPI18YBR004C 1302 nt8.89□□□□□ -0.99
TY1A-PR2P0CX60 ADK2YER170W 678 nt8.89□□□□□ -0.99
TY1A-PR2P0CX60 ARI1YGL157W 1044 nt8.89□□□□□ -0.99
TY1A-PR2P0CX60 DUS1YML080W 1272 nt8.89□□□□□ -0.99
TY1A-PR2P0CX60 RXT2YBR095C 1293 nt8.89□□□□□ -0.99
TY1A-PR2P0CX60 RIM8YGL045W 1629 nt8.88□□□□□ -0.99
TY1A-PR2P0CX60 YDL119CYDL119C 924 nt8.88□□□□□ -0.99
TY1A-PR2P0CX60 YFL067WYFL067W 528 nt8.88□□□□□ -0.99
TY1A-PR2P0CX60 YLR271WYLR271W 825 nt8.88□□□□□ -0.99
TY1A-PR2P0CX60 TLG2YOL018C 1194 nt8.88□□□□□ -0.99
TY1A-PR2P0CX60 MIC12YBR262C 321 nt8.88□□□□□ -0.99
TY1A-PR2P0CX60 CDC10YCR002C 969 nt8.87□□□□□ -0.99
TY1A-PR2P0CX60 YDL114WYDL114W 927 nt8.87□□□□□ -0.99
TY1A-PR2P0CX60 MRP13YGR084C 1020 nt8.87□□□□□ -0.99
TY1A-PR2P0CX60 PPA2YMR267W 933 nt8.87□□□□□ -0.99
TY1A-PR2P0CX60 CSG2YBR036C 1233 nt8.87□□□□□ -0.99
TY1A-PR2P0CX60 VBA3YCL069W 1377 nt8.86□□□□□ -0.99
TY1A-PR2P0CX60 TRM5YHR070W 1500 nt8.86□□□□□ -0.99
Retrieved 100 of 7,029 protein–RNA pairs in 47.4 ms