Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 SAM50YNL026W 1455 nt8□□□□□ -1.13
CDC9P04819 HXT10YFL011W 1641 nt8□□□□□ -1.13
CDC9P04819 YKR023WYKR023W 1593 nt7.99□□□□□ -1.13
CDC9P04819 IGD1YFR017C 588 nt7.98□□□□□ -1.13
CDC9P04819 ENT4YLL038C 744 nt7.98□□□□□ -1.13
CDC9P04819 YDR455CYDR455C 309 nt7.97□□□□□ -1.13
CDC9P04819 OYE2YHR179W 1203 nt7.97□□□□□ -1.13
CDC9P04819 ASP3-1YLR155C 1089 nt7.97□□□□□ -1.13
CDC9P04819 ASP3-2YLR157C 1089 nt7.97□□□□□ -1.13
CDC9P04819 ASP3-3YLR158C 1089 nt7.97□□□□□ -1.13
CDC9P04819 ASP3-4YLR160C 1089 nt7.97□□□□□ -1.13
CDC9P04819 KRE1YNL322C 942 nt7.97□□□□□ -1.13
CDC9P04819 TPS1YBR126C 1488 nt7.97□□□□□ -1.13
CDC9P04819 RPD3YNL330C 1302 nt7.96□□□□□ -1.14
CDC9P04819 ITR2YOL103W 1830 nt7.96□□□□□ -1.14
CDC9P04819 BUD20YLR074C 501 nt7.95□□□□□ -1.14
CDC9P04819 EAF3YPR023C 1206 nt7.95□□□□□ -1.14
CDC9P04819 MAK32YCR019W 1092 nt7.93□□□□□ -1.14
CDC9P04819 SWM1YDR260C 513 nt7.93□□□□□ -1.14
CDC9P04819 YLR173WYLR173W 1827 nt7.93□□□□□ -1.14
CDC9P04819 IPL1YPL209C 1104 nt7.92□□□□□ -1.14
CDC9P04819 ECM27YJR106W 2178 nt7.9□□□□□ -1.14
CDC9P04819 YCR025CYCR025C 411 nt7.9□□□□□ -1.14
CDC9P04819 tA(AGC)DtA(AGC)D 73 nt7.9□□□□□ -1.14
CDC9P04819 tA(AGC)FtA(AGC)F 73 nt7.9□□□□□ -1.14
CDC9P04819 tA(AGC)GtA(AGC)G 73 nt7.9□□□□□ -1.14
CDC9P04819 tA(AGC)HtA(AGC)H 73 nt7.9□□□□□ -1.14
CDC9P04819 tA(AGC)JtA(AGC)J 73 nt7.9□□□□□ -1.14
CDC9P04819 tA(AGC)K1tA(AGC)K1 73 nt7.9□□□□□ -1.14
CDC9P04819 tA(AGC)K2tA(AGC)K2 73 nt7.9□□□□□ -1.14
CDC9P04819 tA(AGC)LtA(AGC)L 73 nt7.9□□□□□ -1.14
CDC9P04819 tA(AGC)M1tA(AGC)M1 73 nt7.9□□□□□ -1.14
CDC9P04819 tA(AGC)M2tA(AGC)M2 73 nt7.9□□□□□ -1.14
CDC9P04819 tA(AGC)PtA(AGC)P 73 nt7.9□□□□□ -1.14
CDC9P04819 CDD1YLR245C 429 nt7.9□□□□□ -1.14
CDC9P04819 VMA11YPL234C 495 nt7.9□□□□□ -1.14
CDC9P04819 PZF1YPR186C 1290 nt7.9□□□□□ -1.14
CDC9P04819 LSM5YER146W 282 nt7.89□□□□□ -1.15
CDC9P04819 TMA23YMR269W 636 nt7.89□□□□□ -1.15
CDC9P04819 ERG13YML126C 1476 nt7.88□□□□□ -1.15
CDC9P04819 SAC7YDR389W 1965 nt7.88□□□□□ -1.15
CDC9P04819 HMT1YBR034C 1047 nt7.88□□□□□ -1.15
CDC9P04819 AGP3YFL055W 1677 nt7.87□□□□□ -1.15
CDC9P04819 DDI1YER143W 1287 nt7.87□□□□□ -1.15
CDC9P04819 RPC31YNL151C 756 nt7.86□□□□□ -1.15
CDC9P04819 RIM2YBR192W 1134 nt7.86□□□□□ -1.15
CDC9P04819 DPL1YDR294C 1770 nt7.85□□□□□ -1.15
CDC9P04819 YRF1-2YER190W 5046 nt7.85□□□□□ -1.15
CDC9P04819 SPS100YHR139C 981 nt7.85□□□□□ -1.15
CDC9P04819 UBP13YBL067C 2244 nt7.84□□□□□ -1.15
CDC9P04819 SNU66YOR308C 1764 nt7.84□□□□□ -1.15
CDC9P04819 IMO32YGR031W 1029 nt7.84□□□□□ -1.15
CDC9P04819 PAM17YKR065C 594 nt7.84□□□□□ -1.15
CDC9P04819 LYS20YDL182W 1287 nt7.83□□□□□ -1.16
CDC9P04819 YMR007WYMR007W 381 nt7.83□□□□□ -1.16
CDC9P04819 NSG2YNL156C 900 nt7.83□□□□□ -1.16
CDC9P04819 SNX3YOR357C 489 nt7.83□□□□□ -1.16
CDC9P04819 RPL12BYDR418W 498 nt7.82□□□□□ -1.16
CDC9P04819 NAS2YIL007C 663 nt7.82□□□□□ -1.16
CDC9P04819 FLX1YIL134W 936 nt7.82□□□□□ -1.16
CDC9P04819 COX16YJL003W 357 nt7.82□□□□□ -1.16
CDC9P04819 YOR343CYOR343C 327 nt7.82□□□□□ -1.16
CDC9P04819 EHD3YDR036C 1503 nt7.81□□□□□ -1.16
CDC9P04819 NPL6YMR091C 1308 nt7.8□□□□□ -1.16
CDC9P04819 NBA1YOL070C 1506 nt7.8□□□□□ -1.16
CDC9P04819 KRR1YCL059C 951 nt7.8□□□□□ -1.16
CDC9P04819 RRT8YOL048C 1029 nt7.8□□□□□ -1.16
CDC9P04819 HXK1YFR053C 1458 nt7.8□□□□□ -1.16
CDC9P04819 ALD5YER073W 1563 nt7.8□□□□□ -1.16
CDC9P04819 THP3YPR045C 1413 nt7.79□□□□□ -1.16
CDC9P04819 RCR1YBR005W 642 nt7.79□□□□□ -1.16
CDC9P04819 SNU71YGR013W 1863 nt7.79□□□□□ -1.16
CDC9P04819 LEU4YNL104C 1860 nt7.79□□□□□ -1.16
CDC9P04819 PCP1YGR101W 1041 nt7.77□□□□□ -1.17
CDC9P04819 ELO1YJL196C 933 nt7.77□□□□□ -1.17
CDC9P04819 YMR265CYMR265C 1386 nt7.76□□□□□ -1.17
CDC9P04819 YFR036W-AYFR036W-A 651 nt7.76□□□□□ -1.17
CDC9P04819 FSH2YMR222C 672 nt7.76□□□□□ -1.17
CDC9P04819 YCR049CYCR049C 447 nt7.75□□□□□ -1.17
CDC9P04819 INH1YDL181W 258 nt7.75□□□□□ -1.17
CDC9P04819 YNR064CYNR064C 873 nt7.75□□□□□ -1.17
CDC9P04819 SGV1YPR161C 1974 nt7.75□□□□□ -1.17
CDC9P04819 SER2YGR208W 930 nt7.74□□□□□ -1.17
CDC9P04819 YAL016C-AYAL016C-A 315 nt7.74□□□□□ -1.17
CDC9P04819 SUV3YPL029W 2214 nt7.74□□□□□ -1.17
CDC9P04819 HAP5YOR358W 729 nt7.73□□□□□ -1.17
CDC9P04819 ADE2YOR128C 1716 nt7.72□□□□□ -1.17
CDC9P04819 TVP23YDR084C 600 nt7.72□□□□□ -1.17
CDC9P04819 ADE8YDR408C 645 nt7.72□□□□□ -1.17
CDC9P04819 YOR072WYOR072W 315 nt7.72□□□□□ -1.17
CDC9P04819 YOR268CYOR268C 399 nt7.72□□□□□ -1.17
CDC9P04819 FET5YFL041W 1869 nt7.72□□□□□ -1.17
CDC9P04819 HTS1YPR033C 1641 nt7.71□□□□□ -1.17
CDC9P04819 NPP2YEL016C 1482 nt7.71□□□□□ -1.18
CDC9P04819 PHB2YGR231C 933 nt7.71□□□□□ -1.18
CDC9P04819 HRA1HRA1 564 nt7.71□□□□□ -1.18
CDC9P04819 CYC3YAL039C 810 nt7.71□□□□□ -1.18
CDC9P04819 tE(CUC)DtE(CUC)D 72 nt7.7□□□□□ -1.18
CDC9P04819 tE(CUC)ItE(CUC)I 72 nt7.7□□□□□ -1.18
CDC9P04819 ADH3YMR083W 1128 nt7.7□□□□□ -1.18
Retrieved 100 of 7,029 protein–RNA pairs in 76.8 ms