Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
HMGCRP04035 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
HMGCRP04035 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
HMGCRP04035 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.81■■■□□ 2.36
HMGCRP04035 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
HMGCRP04035 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
HMGCRP04035 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
HMGCRP04035 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
HMGCRP04035 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.79■■■□□ 2.36
HMGCRP04035 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
HMGCRP04035 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
HMGCRP04035 NTF6A-201ENST00000591175 560 ntBASIC29.78■■■□□ 2.36
HMGCRP04035 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
HMGCRP04035 LINC00273-201ENST00000539813 1452 ntBASIC29.77■■■□□ 2.36
HMGCRP04035 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
HMGCRP04035 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
HMGCRP04035 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
HMGCRP04035 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
HMGCRP04035 AC012354.3-201ENST00000623734 483 ntBASIC29.75■■■□□ 2.35
HMGCRP04035 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
HMGCRP04035 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
HMGCRP04035 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
HMGCRP04035 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC29.74■■■□□ 2.35
HMGCRP04035 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
HMGCRP04035 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
HMGCRP04035 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
HMGCRP04035 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
HMGCRP04035 AC022413.1-201ENST00000624602 984 ntBASIC29.72■■■□□ 2.35
HMGCRP04035 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
HMGCRP04035 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
HMGCRP04035 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC29.71■■■□□ 2.35
HMGCRP04035 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
HMGCRP04035 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
HMGCRP04035 AC120057.4-201ENST00000624722 1615 ntBASIC29.69■■■□□ 2.34
HMGCRP04035 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.68■■■□□ 2.34
HMGCRP04035 HES4-202ENST00000428771 1040 ntTSL 2 BASIC29.68■■■□□ 2.34
HMGCRP04035 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
HMGCRP04035 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
HMGCRP04035 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.67■■■□□ 2.34
HMGCRP04035 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
HMGCRP04035 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
HMGCRP04035 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
HMGCRP04035 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
HMGCRP04035 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
HMGCRP04035 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
HMGCRP04035 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
HMGCRP04035 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC29.63■■■□□ 2.33
HMGCRP04035 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.62■■■□□ 2.33
HMGCRP04035 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC29.61■■■□□ 2.33
HMGCRP04035 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
HMGCRP04035 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.61■■■□□ 2.33
HMGCRP04035 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
HMGCRP04035 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC29.6■■■□□ 2.33
HMGCRP04035 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
HMGCRP04035 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
HMGCRP04035 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
HMGCRP04035 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.59■■■□□ 2.33
HMGCRP04035 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
HMGCRP04035 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
HMGCRP04035 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.59■■■□□ 2.33
HMGCRP04035 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC29.59■■■□□ 2.33
HMGCRP04035 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
HMGCRP04035 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
HMGCRP04035 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.57■■■□□ 2.32
HMGCRP04035 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
HMGCRP04035 AC008813.1-201ENST00000536597 885 ntBASIC29.57■■■□□ 2.32
HMGCRP04035 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
HMGCRP04035 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
HMGCRP04035 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
HMGCRP04035 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
HMGCRP04035 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.54■■■□□ 2.32
HMGCRP04035 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
HMGCRP04035 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
HMGCRP04035 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
HMGCRP04035 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC29.53■■■□□ 2.32
HMGCRP04035 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
HMGCRP04035 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
HMGCRP04035 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
HMGCRP04035 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
HMGCRP04035 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
HMGCRP04035 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.52■■■□□ 2.32
HMGCRP04035 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.52■■■□□ 2.32
HMGCRP04035 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.51■■■□□ 2.32
HMGCRP04035 AL033527.3-201ENST00000566366 1196 ntBASIC29.51■■■□□ 2.31
HMGCRP04035 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
HMGCRP04035 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
HMGCRP04035 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
HMGCRP04035 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
HMGCRP04035 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
HMGCRP04035 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
HMGCRP04035 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
HMGCRP04035 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC29.48■■■□□ 2.31
HMGCRP04035 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.47■■■□□ 2.31
HMGCRP04035 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC29.47■■■□□ 2.31
HMGCRP04035 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC29.47■■■□□ 2.31
HMGCRP04035 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
HMGCRP04035 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.47■■■□□ 2.31
HMGCRP04035 AC018358.1-201ENST00000631079 1402 ntBASIC29.46■■■□□ 2.31
HMGCRP04035 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.45■■■□□ 2.31
HMGCRP04035 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms