Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TGFAP01135 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TGFAP01135 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.54■■□□□ 1.04
TGFAP01135 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TGFAP01135 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TGFAP01135 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.54■■□□□ 1.04
TGFAP01135 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
TGFAP01135 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TGFAP01135 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TGFAP01135 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TGFAP01135 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.51■■□□□ 1.03
TGFAP01135 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.51■■□□□ 1.03
TGFAP01135 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.51■■□□□ 1.03
TGFAP01135 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.51■■□□□ 1.03
TGFAP01135 LINC00273-201ENST00000539813 1452 ntBASIC21.51■■□□□ 1.03
TGFAP01135 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
TGFAP01135 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC21.5■■□□□ 1.03
TGFAP01135 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.49■■□□□ 1.03
TGFAP01135 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TGFAP01135 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
TGFAP01135 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.49■■□□□ 1.03
TGFAP01135 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.48■■□□□ 1.03
TGFAP01135 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.48■■□□□ 1.03
TGFAP01135 AC010864.1-201ENST00000609407 1511 ntBASIC21.48■■□□□ 1.03
TGFAP01135 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TGFAP01135 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.47■■□□□ 1.03
TGFAP01135 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
TGFAP01135 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TGFAP01135 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TGFAP01135 RARRES2P2-201ENST00000394842 485 ntBASIC21.46■■□□□ 1.03
TGFAP01135 GPX1-201ENST00000419349 1106 ntBASIC21.46■■□□□ 1.03
TGFAP01135 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TGFAP01135 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TGFAP01135 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TGFAP01135 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TGFAP01135 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.45■■□□□ 1.02
TGFAP01135 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
TGFAP01135 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TGFAP01135 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TGFAP01135 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TGFAP01135 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TGFAP01135 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.43■■□□□ 1.02
TGFAP01135 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TGFAP01135 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TGFAP01135 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.42■■□□□ 1.02
TGFAP01135 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TGFAP01135 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.42■■□□□ 1.02
TGFAP01135 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TGFAP01135 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TGFAP01135 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TGFAP01135 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TGFAP01135 ABHD17AP5-201ENST00000580133 923 ntBASIC21.4■■□□□ 1.02
TGFAP01135 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TGFAP01135 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
TGFAP01135 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TGFAP01135 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TGFAP01135 RNF126P1-201ENST00000567452 1320 ntBASIC21.38■■□□□ 1.01
TGFAP01135 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
TGFAP01135 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TGFAP01135 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TGFAP01135 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TGFAP01135 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.37■■□□□ 1.01
TGFAP01135 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.37■■□□□ 1.01
TGFAP01135 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TGFAP01135 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TGFAP01135 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TGFAP01135 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TGFAP01135 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TGFAP01135 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TGFAP01135 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TGFAP01135 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TGFAP01135 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TGFAP01135 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TGFAP01135 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TGFAP01135 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TGFAP01135 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.35■■□□□ 1.01
TGFAP01135 AC022413.1-201ENST00000624602 984 ntBASIC21.34■■□□□ 1.01
TGFAP01135 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TGFAP01135 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TGFAP01135 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TGFAP01135 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TGFAP01135 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TGFAP01135 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TGFAP01135 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.32■■□□□ 1
TGFAP01135 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TGFAP01135 AC008813.1-201ENST00000536597 885 ntBASIC21.31■■□□□ 1
TGFAP01135 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.31■■□□□ 1
TGFAP01135 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.31■■□□□ 1
TGFAP01135 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TGFAP01135 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TGFAP01135 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TGFAP01135 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TGFAP01135 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
TGFAP01135 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TGFAP01135 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.29■■□□□ 1
TGFAP01135 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TGFAP01135 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TGFAP01135 AC127502.1-201ENST00000399971 1502 ntBASIC21.29■■□□□ 1
TGFAP01135 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TGFAP01135 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms