Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ABCA1O95477 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
ABCA1O95477 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ABCA1O95477 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ABCA1O95477 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
ABCA1O95477 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
ABCA1O95477 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.72■■□□□ 1.07
ABCA1O95477 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ABCA1O95477 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ABCA1O95477 GPX1-201ENST00000419349 1106 ntBASIC21.72■■□□□ 1.07
ABCA1O95477 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ABCA1O95477 RNF126P1-201ENST00000567452 1320 ntBASIC21.71■■□□□ 1.07
ABCA1O95477 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.71■■□□□ 1.07
ABCA1O95477 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
ABCA1O95477 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.7■■□□□ 1.06
ABCA1O95477 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ABCA1O95477 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.7■■□□□ 1.06
ABCA1O95477 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
ABCA1O95477 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA1O95477 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA1O95477 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.69■■□□□ 1.06
ABCA1O95477 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA1O95477 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
ABCA1O95477 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA1O95477 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA1O95477 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA1O95477 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA1O95477 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA1O95477 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA1O95477 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ABCA1O95477 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCA1O95477 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
ABCA1O95477 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ABCA1O95477 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
ABCA1O95477 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ABCA1O95477 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.67■■□□□ 1.06
ABCA1O95477 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ABCA1O95477 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
ABCA1O95477 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.67■■□□□ 1.06
ABCA1O95477 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ABCA1O95477 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCA1O95477 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCA1O95477 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCA1O95477 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.65■■□□□ 1.06
ABCA1O95477 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCA1O95477 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
ABCA1O95477 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.64■■□□□ 1.05
ABCA1O95477 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.64■■□□□ 1.05
ABCA1O95477 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ABCA1O95477 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
ABCA1O95477 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.63■■□□□ 1.05
ABCA1O95477 LINC00273-201ENST00000539813 1452 ntBASIC21.62■■□□□ 1.05
ABCA1O95477 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.62■■□□□ 1.05
ABCA1O95477 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.61■■□□□ 1.05
ABCA1O95477 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
ABCA1O95477 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ABCA1O95477 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ABCA1O95477 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.6■■□□□ 1.05
ABCA1O95477 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA1O95477 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA1O95477 NTF6A-201ENST00000591175 560 ntBASIC21.6■■□□□ 1.05
ABCA1O95477 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA1O95477 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ABCA1O95477 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ABCA1O95477 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ABCA1O95477 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.58■■□□□ 1.05
ABCA1O95477 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ABCA1O95477 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.58■■□□□ 1.04
ABCA1O95477 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
ABCA1O95477 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.58■■□□□ 1.04
ABCA1O95477 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
ABCA1O95477 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ABCA1O95477 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.57■■□□□ 1.04
ABCA1O95477 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.57■■□□□ 1.04
ABCA1O95477 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ABCA1O95477 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ABCA1O95477 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ABCA1O95477 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ABCA1O95477 AC120057.4-201ENST00000624722 1615 ntBASIC21.56■■□□□ 1.04
ABCA1O95477 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.55■■□□□ 1.04
ABCA1O95477 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ABCA1O95477 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
ABCA1O95477 AC012354.3-201ENST00000623734 483 ntBASIC21.54■■□□□ 1.04
ABCA1O95477 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
ABCA1O95477 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.54■■□□□ 1.04
ABCA1O95477 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.54■■□□□ 1.04
ABCA1O95477 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
ABCA1O95477 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ABCA1O95477 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ABCA1O95477 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ABCA1O95477 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ABCA1O95477 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ABCA1O95477 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ABCA1O95477 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ABCA1O95477 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ABCA1O95477 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ABCA1O95477 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCA1O95477 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCA1O95477 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCA1O95477 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms