Protein–RNA interactions for Protein: O75462

CRLF1, Cytokine receptor-like factor 1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1O75462 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.37■■□□□ 1.01
CRLF1O75462 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.36■■□□□ 1.01
CRLF1O75462 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.34■■□□□ 1.01
CRLF1O75462 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CRLF1O75462 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.34■■□□□ 1.01
CRLF1O75462 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CRLF1O75462 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.33■■□□□ 1.01
CRLF1O75462 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CRLF1O75462 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.33■■□□□ 1.01
CRLF1O75462 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CRLF1O75462 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CRLF1O75462 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.32■■□□□ 1
CRLF1O75462 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.32■■□□□ 1
CRLF1O75462 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CRLF1O75462 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.31■■□□□ 1
CRLF1O75462 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.31■■□□□ 1
CRLF1O75462 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
CRLF1O75462 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CRLF1O75462 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.3■■□□□ 1
CRLF1O75462 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.3■■□□□ 1
CRLF1O75462 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.29■■□□□ 1
CRLF1O75462 U85056.1-201ENST00000616429 682 ntBASIC21.29■■□□□ 1
CRLF1O75462 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.29■■□□□ 1
CRLF1O75462 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.28■■□□□ 1
CRLF1O75462 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.28■■□□□ 1
CRLF1O75462 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CRLF1O75462 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CRLF1O75462 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.27■□□□□ 0.99
CRLF1O75462 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CRLF1O75462 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CRLF1O75462 TSPY13P-201ENST00000338964 914 ntBASIC21.26■□□□□ 0.99
CRLF1O75462 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.26■□□□□ 0.99
CRLF1O75462 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CRLF1O75462 RARRES2P1-201ENST00000474487 481 ntBASIC21.24■□□□□ 0.99
CRLF1O75462 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.24■□□□□ 0.99
CRLF1O75462 LINC00273-201ENST00000539813 1452 ntBASIC21.24■□□□□ 0.99
CRLF1O75462 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CRLF1O75462 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CRLF1O75462 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CRLF1O75462 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CRLF1O75462 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CRLF1O75462 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CRLF1O75462 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CRLF1O75462 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CRLF1O75462 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.21■□□□□ 0.99
CRLF1O75462 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CRLF1O75462 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CRLF1O75462 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.19■□□□□ 0.98
CRLF1O75462 AC004987.1-201ENST00000428627 508 ntBASIC21.19■□□□□ 0.98
CRLF1O75462 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CRLF1O75462 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC21.18■□□□□ 0.98
CRLF1O75462 ATP5G2P3-201ENST00000429083 425 ntBASIC21.18■□□□□ 0.98
CRLF1O75462 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.18■□□□□ 0.98
CRLF1O75462 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CRLF1O75462 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CRLF1O75462 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.17■□□□□ 0.98
CRLF1O75462 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CRLF1O75462 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.16■□□□□ 0.98
CRLF1O75462 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.16■□□□□ 0.98
CRLF1O75462 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.16■□□□□ 0.98
CRLF1O75462 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CRLF1O75462 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRLF1O75462 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRLF1O75462 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.14■□□□□ 0.98
CRLF1O75462 KRT18P60-201ENST00000312876 1297 ntBASIC21.14■□□□□ 0.97
CRLF1O75462 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.14■□□□□ 0.97
CRLF1O75462 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRLF1O75462 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.13■□□□□ 0.97
CRLF1O75462 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CRLF1O75462 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRLF1O75462 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRLF1O75462 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CRLF1O75462 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.12■□□□□ 0.97
CRLF1O75462 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CRLF1O75462 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRLF1O75462 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.12■□□□□ 0.97
CRLF1O75462 AC060814.1-201ENST00000554326 538 ntBASIC21.11■□□□□ 0.97
CRLF1O75462 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CRLF1O75462 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRLF1O75462 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CRLF1O75462 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CRLF1O75462 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.09■□□□□ 0.97
CRLF1O75462 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.09■□□□□ 0.97
CRLF1O75462 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CRLF1O75462 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.08■□□□□ 0.97
CRLF1O75462 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CRLF1O75462 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CRLF1O75462 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRLF1O75462 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.07■□□□□ 0.96
CRLF1O75462 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRLF1O75462 AC019069.1-201ENST00000610008 1333 ntBASIC21.06■□□□□ 0.96
CRLF1O75462 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CRLF1O75462 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRLF1O75462 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.06■□□□□ 0.96
CRLF1O75462 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRLF1O75462 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRLF1O75462 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC21.05■□□□□ 0.96
CRLF1O75462 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CRLF1O75462 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CRLF1O75462 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms