Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
XRCC2O43543 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.45■■□□□ 1.18
XRCC2O43543 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
XRCC2O43543 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.45■■□□□ 1.18
XRCC2O43543 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
XRCC2O43543 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
XRCC2O43543 MIR3665-201ENST00000578708 105 ntBASIC22.44■■□□□ 1.18
XRCC2O43543 AP006261.1-201ENST00000584783 668 ntBASIC22.44■■□□□ 1.18
XRCC2O43543 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
XRCC2O43543 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
XRCC2O43543 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.43■■□□□ 1.18
XRCC2O43543 AC127502.1-201ENST00000399971 1502 ntBASIC22.42■■□□□ 1.18
XRCC2O43543 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
XRCC2O43543 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
XRCC2O43543 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
XRCC2O43543 AP004833.2-201ENST00000532228 1454 ntBASIC22.41■■□□□ 1.18
XRCC2O43543 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.41■■□□□ 1.18
XRCC2O43543 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.41■■□□□ 1.18
XRCC2O43543 DUX4L28-201ENST00000623687 678 ntBASIC22.41■■□□□ 1.18
XRCC2O43543 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
XRCC2O43543 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
XRCC2O43543 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.4■■□□□ 1.18
XRCC2O43543 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
XRCC2O43543 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.4■■□□□ 1.18
XRCC2O43543 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
XRCC2O43543 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.4■■□□□ 1.18
XRCC2O43543 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
XRCC2O43543 AC108673.1-201ENST00000510422 1159 ntBASIC22.39■■□□□ 1.17
XRCC2O43543 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.39■■□□□ 1.17
XRCC2O43543 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
XRCC2O43543 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
XRCC2O43543 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
XRCC2O43543 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
XRCC2O43543 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.38■■□□□ 1.17
XRCC2O43543 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.38■■□□□ 1.17
XRCC2O43543 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
XRCC2O43543 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
XRCC2O43543 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
XRCC2O43543 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.35■■□□□ 1.17
XRCC2O43543 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.34■■□□□ 1.17
XRCC2O43543 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
XRCC2O43543 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.34■■□□□ 1.17
XRCC2O43543 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
XRCC2O43543 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
XRCC2O43543 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
XRCC2O43543 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
XRCC2O43543 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
XRCC2O43543 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.33■■□□□ 1.16
XRCC2O43543 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
XRCC2O43543 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
XRCC2O43543 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
XRCC2O43543 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
XRCC2O43543 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
XRCC2O43543 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
XRCC2O43543 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
XRCC2O43543 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
XRCC2O43543 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
XRCC2O43543 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
XRCC2O43543 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
XRCC2O43543 AC142086.6-201ENST00000621154 1765 ntBASIC22.29■■□□□ 1.16
XRCC2O43543 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
XRCC2O43543 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
XRCC2O43543 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
XRCC2O43543 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.28■■□□□ 1.16
XRCC2O43543 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
XRCC2O43543 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
XRCC2O43543 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.27■■□□□ 1.16
XRCC2O43543 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
XRCC2O43543 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
XRCC2O43543 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.27■■□□□ 1.15
XRCC2O43543 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.26■■□□□ 1.15
XRCC2O43543 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.26■■□□□ 1.15
XRCC2O43543 AL162393.1-201ENST00000437852 946 ntBASIC22.26■■□□□ 1.15
XRCC2O43543 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
XRCC2O43543 MIR6090-201ENST00000622481 60 ntBASIC22.26■■□□□ 1.15
XRCC2O43543 DRD5P2-201ENST00000421395 2012 ntBASIC22.26■■□□□ 1.15
XRCC2O43543 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
XRCC2O43543 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.25■■□□□ 1.15
XRCC2O43543 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
XRCC2O43543 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.25■■□□□ 1.15
XRCC2O43543 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
XRCC2O43543 AC087741.3-201ENST00000624270 1347 ntBASIC22.24■■□□□ 1.15
XRCC2O43543 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.24■■□□□ 1.15
XRCC2O43543 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.23■■□□□ 1.15
XRCC2O43543 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
XRCC2O43543 AC044849.2-201ENST00000606596 710 ntBASIC22.23■■□□□ 1.15
XRCC2O43543 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.23■■□□□ 1.15
XRCC2O43543 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
XRCC2O43543 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
XRCC2O43543 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
XRCC2O43543 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.21■■□□□ 1.15
XRCC2O43543 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
XRCC2O43543 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.21■■□□□ 1.15
XRCC2O43543 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
XRCC2O43543 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.21■■□□□ 1.15
XRCC2O43543 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.15
XRCC2O43543 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
XRCC2O43543 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
XRCC2O43543 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.2■■□□□ 1.14
XRCC2O43543 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms