Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.39■■■□□ 2.62
CLRN2A0PK11 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
CLRN2A0PK11 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CLRN2A0PK11 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CLRN2A0PK11 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.36■■■□□ 2.61
CLRN2A0PK11 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.36■■■□□ 2.61
CLRN2A0PK11 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.35■■■□□ 2.61
CLRN2A0PK11 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.35■■■□□ 2.61
CLRN2A0PK11 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.35■■■□□ 2.61
CLRN2A0PK11 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC31.34■■■□□ 2.61
CLRN2A0PK11 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.34■■■□□ 2.61
CLRN2A0PK11 LINC00273-201ENST00000539813 1452 ntBASIC31.33■■■□□ 2.61
CLRN2A0PK11 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CLRN2A0PK11 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CLRN2A0PK11 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CLRN2A0PK11 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CLRN2A0PK11 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
CLRN2A0PK11 AC010864.1-201ENST00000609407 1511 ntBASIC31.3■■■□□ 2.6
CLRN2A0PK11 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.3■■■□□ 2.6
CLRN2A0PK11 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.3■■■□□ 2.6
CLRN2A0PK11 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
CLRN2A0PK11 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.3■■■□□ 2.6
CLRN2A0PK11 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC31.3■■■□□ 2.6
CLRN2A0PK11 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CLRN2A0PK11 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CLRN2A0PK11 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.29■■■□□ 2.6
CLRN2A0PK11 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CLRN2A0PK11 RARRES2P2-201ENST00000394842 485 ntBASIC31.28■■■□□ 2.6
CLRN2A0PK11 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CLRN2A0PK11 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CLRN2A0PK11 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CLRN2A0PK11 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CLRN2A0PK11 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.26■■■□□ 2.6
CLRN2A0PK11 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CLRN2A0PK11 GPX1-201ENST00000419349 1106 ntBASIC31.25■■■□□ 2.59
CLRN2A0PK11 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC31.25■■■□□ 2.59
CLRN2A0PK11 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.25■■■□□ 2.59
CLRN2A0PK11 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
CLRN2A0PK11 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CLRN2A0PK11 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CLRN2A0PK11 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.23■■■□□ 2.59
CLRN2A0PK11 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CLRN2A0PK11 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CLRN2A0PK11 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
CLRN2A0PK11 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CLRN2A0PK11 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CLRN2A0PK11 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
CLRN2A0PK11 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
CLRN2A0PK11 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.15■■■□□ 2.58
CLRN2A0PK11 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.15■■■□□ 2.58
CLRN2A0PK11 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
CLRN2A0PK11 ABHD17AP5-201ENST00000580133 923 ntBASIC31.15■■■□□ 2.58
CLRN2A0PK11 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CLRN2A0PK11 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC31.14■■■□□ 2.58
CLRN2A0PK11 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CLRN2A0PK11 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.57
CLRN2A0PK11 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CLRN2A0PK11 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.13■■■□□ 2.57
CLRN2A0PK11 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CLRN2A0PK11 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CLRN2A0PK11 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
CLRN2A0PK11 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CLRN2A0PK11 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CLRN2A0PK11 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CLRN2A0PK11 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CLRN2A0PK11 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
CLRN2A0PK11 RNF126P1-201ENST00000567452 1320 ntBASIC31.11■■■□□ 2.57
CLRN2A0PK11 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CLRN2A0PK11 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CLRN2A0PK11 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CLRN2A0PK11 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CLRN2A0PK11 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.08■■■□□ 2.57
CLRN2A0PK11 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.06■■■□□ 2.56
CLRN2A0PK11 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.06■■■□□ 2.56
CLRN2A0PK11 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.06■■■□□ 2.56
CLRN2A0PK11 AC127502.1-201ENST00000399971 1502 ntBASIC31.06■■■□□ 2.56
CLRN2A0PK11 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CLRN2A0PK11 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CLRN2A0PK11 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CLRN2A0PK11 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CLRN2A0PK11 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CLRN2A0PK11 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CLRN2A0PK11 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
CLRN2A0PK11 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
CLRN2A0PK11 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
CLRN2A0PK11 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CLRN2A0PK11 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CLRN2A0PK11 AC022413.1-201ENST00000624602 984 ntBASIC31.02■■■□□ 2.56
CLRN2A0PK11 WHAMMP2-203ENST00000563942 1603 ntBASIC31.02■■■□□ 2.56
CLRN2A0PK11 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.55
CLRN2A0PK11 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
CLRN2A0PK11 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC31■■■□□ 2.55
CLRN2A0PK11 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CLRN2A0PK11 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.99■■■□□ 2.55
CLRN2A0PK11 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CLRN2A0PK11 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.98■■■□□ 2.55
CLRN2A0PK11 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
CLRN2A0PK11 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.97■■■□□ 2.55
CLRN2A0PK11 AC135983.2-203ENST00000454486 1613 ntBASIC30.97■■■□□ 2.55
CLRN2A0PK11 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms