Protein–RNA interactions for Protein: A0A0C4DH55

IGKV3D-7, Immunoglobulin kappa variable 3D-7, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-7A0A0C4DH55 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IGKV3D-7A0A0C4DH55 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
IGKV3D-7A0A0C4DH55 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IGKV3D-7A0A0C4DH55 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IGKV3D-7A0A0C4DH55 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.28■□□□□ 0.2
IGKV3D-7A0A0C4DH55 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC16.28■□□□□ 0.2
IGKV3D-7A0A0C4DH55 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
IGKV3D-7A0A0C4DH55 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IGKV3D-7A0A0C4DH55 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IGKV3D-7A0A0C4DH55 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV3D-7A0A0C4DH55 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IGKV3D-7A0A0C4DH55 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
IGKV3D-7A0A0C4DH55 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC16.27■□□□□ 0.2
IGKV3D-7A0A0C4DH55 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
IGKV3D-7A0A0C4DH55 AL449106.1-201ENST00000608517 1980 ntBASIC16.26■□□□□ 0.19
IGKV3D-7A0A0C4DH55 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
IGKV3D-7A0A0C4DH55 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IGKV3D-7A0A0C4DH55 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IGKV3D-7A0A0C4DH55 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IGKV3D-7A0A0C4DH55 ST7-AS1-201ENST00000456775 1889 ntBASIC16.25■□□□□ 0.19
IGKV3D-7A0A0C4DH55 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
IGKV3D-7A0A0C4DH55 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
IGKV3D-7A0A0C4DH55 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC16.25■□□□□ 0.19
IGKV3D-7A0A0C4DH55 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC16.25■□□□□ 0.19
IGKV3D-7A0A0C4DH55 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV3D-7A0A0C4DH55 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV3D-7A0A0C4DH55 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV3D-7A0A0C4DH55 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV3D-7A0A0C4DH55 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.24■□□□□ 0.19
IGKV3D-7A0A0C4DH55 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV3D-7A0A0C4DH55 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV3D-7A0A0C4DH55 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV3D-7A0A0C4DH55 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
IGKV3D-7A0A0C4DH55 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV3D-7A0A0C4DH55 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV3D-7A0A0C4DH55 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV3D-7A0A0C4DH55 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV3D-7A0A0C4DH55 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.23■□□□□ 0.19
IGKV3D-7A0A0C4DH55 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.22■□□□□ 0.19
IGKV3D-7A0A0C4DH55 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.22■□□□□ 0.19
IGKV3D-7A0A0C4DH55 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IGKV3D-7A0A0C4DH55 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IGKV3D-7A0A0C4DH55 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
IGKV3D-7A0A0C4DH55 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IGKV3D-7A0A0C4DH55 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IGKV3D-7A0A0C4DH55 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IGKV3D-7A0A0C4DH55 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC16.21■□□□□ 0.19
IGKV3D-7A0A0C4DH55 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IGKV3D-7A0A0C4DH55 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
IGKV3D-7A0A0C4DH55 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IGKV3D-7A0A0C4DH55 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
IGKV3D-7A0A0C4DH55 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IGKV3D-7A0A0C4DH55 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC16.19■□□□□ 0.18
IGKV3D-7A0A0C4DH55 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IGKV3D-7A0A0C4DH55 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IGKV3D-7A0A0C4DH55 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IGKV3D-7A0A0C4DH55 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IGKV3D-7A0A0C4DH55 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
IGKV3D-7A0A0C4DH55 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IGKV3D-7A0A0C4DH55 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IGKV3D-7A0A0C4DH55 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IGKV3D-7A0A0C4DH55 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IGKV3D-7A0A0C4DH55 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
IGKV3D-7A0A0C4DH55 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC16.17■□□□□ 0.18
IGKV3D-7A0A0C4DH55 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IGKV3D-7A0A0C4DH55 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IGKV3D-7A0A0C4DH55 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IGKV3D-7A0A0C4DH55 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
IGKV3D-7A0A0C4DH55 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IGKV3D-7A0A0C4DH55 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IGKV3D-7A0A0C4DH55 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IGKV3D-7A0A0C4DH55 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IGKV3D-7A0A0C4DH55 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC16.16■□□□□ 0.18
IGKV3D-7A0A0C4DH55 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.16■□□□□ 0.18
IGKV3D-7A0A0C4DH55 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
IGKV3D-7A0A0C4DH55 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IGKV3D-7A0A0C4DH55 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IGKV3D-7A0A0C4DH55 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IGKV3D-7A0A0C4DH55 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
IGKV3D-7A0A0C4DH55 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IGKV3D-7A0A0C4DH55 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IGKV3D-7A0A0C4DH55 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.14■□□□□ 0.17
IGKV3D-7A0A0C4DH55 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IGKV3D-7A0A0C4DH55 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC16.14■□□□□ 0.17
IGKV3D-7A0A0C4DH55 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC16.13■□□□□ 0.17
IGKV3D-7A0A0C4DH55 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV3D-7A0A0C4DH55 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV3D-7A0A0C4DH55 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV3D-7A0A0C4DH55 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV3D-7A0A0C4DH55 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV3D-7A0A0C4DH55 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV3D-7A0A0C4DH55 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.12■□□□□ 0.17
IGKV3D-7A0A0C4DH55 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV3D-7A0A0C4DH55 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.11■□□□□ 0.17
IGKV3D-7A0A0C4DH55 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
IGKV3D-7A0A0C4DH55 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC16.11■□□□□ 0.17
IGKV3D-7A0A0C4DH55 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC16.11■□□□□ 0.17
IGKV3D-7A0A0C4DH55 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
IGKV3D-7A0A0C4DH55 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IGKV3D-7A0A0C4DH55 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms