Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRGV4A0A0C4DH28 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRGV4A0A0C4DH28 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRGV4A0A0C4DH28 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRGV4A0A0C4DH28 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.48■□□□□ 0.55
TRGV4A0A0C4DH28 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRGV4A0A0C4DH28 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRGV4A0A0C4DH28 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRGV4A0A0C4DH28 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRGV4A0A0C4DH28 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRGV4A0A0C4DH28 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TRGV4A0A0C4DH28 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRGV4A0A0C4DH28 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
TRGV4A0A0C4DH28 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRGV4A0A0C4DH28 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.46■□□□□ 0.55
TRGV4A0A0C4DH28 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRGV4A0A0C4DH28 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
TRGV4A0A0C4DH28 MIR3665-201ENST00000578708 105 ntBASIC18.46■□□□□ 0.55
TRGV4A0A0C4DH28 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TRGV4A0A0C4DH28 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.46■□□□□ 0.55
TRGV4A0A0C4DH28 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRGV4A0A0C4DH28 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
TRGV4A0A0C4DH28 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRGV4A0A0C4DH28 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRGV4A0A0C4DH28 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.45■□□□□ 0.54
TRGV4A0A0C4DH28 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRGV4A0A0C4DH28 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRGV4A0A0C4DH28 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRGV4A0A0C4DH28 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV4A0A0C4DH28 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV4A0A0C4DH28 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV4A0A0C4DH28 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.44■□□□□ 0.54
TRGV4A0A0C4DH28 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
TRGV4A0A0C4DH28 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV4A0A0C4DH28 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV4A0A0C4DH28 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRGV4A0A0C4DH28 AP006261.1-201ENST00000584783 668 ntBASIC18.43■□□□□ 0.54
TRGV4A0A0C4DH28 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.43■□□□□ 0.54
TRGV4A0A0C4DH28 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV4A0A0C4DH28 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV4A0A0C4DH28 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.42■□□□□ 0.54
TRGV4A0A0C4DH28 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV4A0A0C4DH28 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRGV4A0A0C4DH28 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.41■□□□□ 0.54
TRGV4A0A0C4DH28 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.41■□□□□ 0.54
TRGV4A0A0C4DH28 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRGV4A0A0C4DH28 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRGV4A0A0C4DH28 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV4A0A0C4DH28 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRGV4A0A0C4DH28 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV4A0A0C4DH28 AL139393.2-201ENST00000608721 2025 ntBASIC18.4■□□□□ 0.54
TRGV4A0A0C4DH28 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV4A0A0C4DH28 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.39■□□□□ 0.54
TRGV4A0A0C4DH28 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.39■□□□□ 0.53
TRGV4A0A0C4DH28 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.39■□□□□ 0.53
TRGV4A0A0C4DH28 AC108673.1-201ENST00000510422 1159 ntBASIC18.39■□□□□ 0.53
TRGV4A0A0C4DH28 DUX4L28-201ENST00000623687 678 ntBASIC18.39■□□□□ 0.53
TRGV4A0A0C4DH28 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV4A0A0C4DH28 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.38■□□□□ 0.53
TRGV4A0A0C4DH28 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.37■□□□□ 0.53
TRGV4A0A0C4DH28 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV4A0A0C4DH28 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV4A0A0C4DH28 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRGV4A0A0C4DH28 AC127502.1-201ENST00000399971 1502 ntBASIC18.36■□□□□ 0.53
TRGV4A0A0C4DH28 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TRGV4A0A0C4DH28 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV4A0A0C4DH28 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.35■□□□□ 0.53
TRGV4A0A0C4DH28 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV4A0A0C4DH28 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.35■□□□□ 0.53
TRGV4A0A0C4DH28 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.35■□□□□ 0.53
TRGV4A0A0C4DH28 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV4A0A0C4DH28 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV4A0A0C4DH28 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.34■□□□□ 0.53
TRGV4A0A0C4DH28 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.34■□□□□ 0.53
TRGV4A0A0C4DH28 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV4A0A0C4DH28 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRGV4A0A0C4DH28 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.33■□□□□ 0.52
TRGV4A0A0C4DH28 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV4A0A0C4DH28 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV4A0A0C4DH28 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.32■□□□□ 0.52
TRGV4A0A0C4DH28 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV4A0A0C4DH28 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV4A0A0C4DH28 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.31■□□□□ 0.52
TRGV4A0A0C4DH28 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRGV4A0A0C4DH28 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRGV4A0A0C4DH28 AL162393.1-201ENST00000437852 946 ntBASIC18.3■□□□□ 0.52
TRGV4A0A0C4DH28 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRGV4A0A0C4DH28 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV4A0A0C4DH28 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV4A0A0C4DH28 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRGV4A0A0C4DH28 AC044849.2-201ENST00000606596 710 ntBASIC18.29■□□□□ 0.52
TRGV4A0A0C4DH28 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRGV4A0A0C4DH28 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRGV4A0A0C4DH28 AP004833.2-201ENST00000532228 1454 ntBASIC18.28■□□□□ 0.52
TRGV4A0A0C4DH28 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TRGV4A0A0C4DH28 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRGV4A0A0C4DH28 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.28■□□□□ 0.52
TRGV4A0A0C4DH28 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TRGV4A0A0C4DH28 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRGV4A0A0C4DH28 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms