Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CDK5RAP2Q96SN8 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CDK5RAP2Q96SN8 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.97□□□□□ -1.13
CDK5RAP2Q96SN8 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 LINC01613-201ENST00000561476 2780 ntBASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 RNA5SP512-201ENST00000364550 120 ntBASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 AL356121.1-201ENST00000442911 156 ntBASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 RN7SL552P-201ENST00000462094 276 ntBASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 RN7SL170P-201ENST00000487098 295 ntBASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.13
CDK5RAP2Q96SN8 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 RPL31P11-201ENST00000426558 1558 ntBASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 AC008937.3-201ENST00000606813 1700 ntBASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 RN7SKP250-201ENST00000363924 321 ntBASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 RN7SKP108-201ENST00000411367 328 ntBASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 TIMM8BP2-201ENST00000445940 251 ntBASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 RN7SL834P-201ENST00000461450 286 ntBASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 HMGN1P16-201ENST00000508308 283 ntBASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 AL499605.1-201ENST00000604628 403 ntBASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.96□□□□□ -1.14
CDK5RAP2Q96SN8 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 AC135983.3-201ENST00000528049 1226 ntBASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 AL365223.1-201ENST00000574864 1297 ntBASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 MIR6806-201ENST00000622141 64 ntBASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP2Q96SN8 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms