Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AL359885.1-201ENST00000415786 903 ntBASIC7.52□□□□□ -1.21
UBE3AQ05086 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
UBE3AQ05086 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.52□□□□□ -1.21
UBE3AQ05086 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
UBE3AQ05086 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.52□□□□□ -1.21
UBE3AQ05086 RPL7AP71-201ENST00000451120 739 ntBASIC7.52□□□□□ -1.21
UBE3AQ05086 RN7SL70P-201ENST00000478322 302 ntBASIC7.52□□□□□ -1.21
UBE3AQ05086 RPL29P23-201ENST00000486188 442 ntBASIC7.52□□□□□ -1.21
UBE3AQ05086 LDHAP1-201ENST00000509421 992 ntBASIC7.52□□□□□ -1.21
UBE3AQ05086 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.52□□□□□ -1.21
UBE3AQ05086 AC121758.1-202ENST00000556917 658 ntBASIC7.52□□□□□ -1.21
UBE3AQ05086 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
UBE3AQ05086 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC7.52□□□□□ -1.21
UBE3AQ05086 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.52□□□□□ -1.21
UBE3AQ05086 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC7.52□□□□□ -1.21
UBE3AQ05086 DIMT1P1-201ENST00000603970 763 ntBASIC7.52□□□□□ -1.21
UBE3AQ05086 AC023513.1-201ENST00000604396 691 ntBASIC7.52□□□□□ -1.21
UBE3AQ05086 AC063962.1-201ENST00000608199 521 ntBASIC7.52□□□□□ -1.21
UBE3AQ05086 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.52□□□□□ -1.21
UBE3AQ05086 GAPDHP41-201ENST00000613707 975 ntBASIC7.52□□□□□ -1.21
UBE3AQ05086 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
UBE3AQ05086 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC7.52□□□□□ -1.21
UBE3AQ05086 AC068213.1-201ENST00000625124 226 ntBASIC7.52□□□□□ -1.21
UBE3AQ05086 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
UBE3AQ05086 AC138627.1-204ENST00000641894 765 ntBASIC7.52□□□□□ -1.21
UBE3AQ05086 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
UBE3AQ05086 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.52□□□□□ -1.21
UBE3AQ05086 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
UBE3AQ05086 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
UBE3AQ05086 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
UBE3AQ05086 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.21
UBE3AQ05086 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
UBE3AQ05086 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
UBE3AQ05086 NACA-216ENST00000550952 2922 ntTSL 2 BASIC7.51□□□□□ -1.21
UBE3AQ05086 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.51□□□□□ -1.21
UBE3AQ05086 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.51□□□□□ -1.21
UBE3AQ05086 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.51□□□□□ -1.21
UBE3AQ05086 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 AC245505.2-201ENST00000553572 3055 ntBASIC7.51□□□□□ -1.21
UBE3AQ05086 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
UBE3AQ05086 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 RN7SKP107-201ENST00000364157 290 ntBASIC7.51□□□□□ -1.21
UBE3AQ05086 CNN3P1-201ENST00000401596 935 ntBASIC7.51□□□□□ -1.21
UBE3AQ05086 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC7.51□□□□□ -1.21
UBE3AQ05086 AL139184.1-202ENST00000422303 222 ntBASIC7.51□□□□□ -1.21
UBE3AQ05086 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.51□□□□□ -1.21
UBE3AQ05086 TIMM8BP2-201ENST00000445940 251 ntBASIC7.51□□□□□ -1.21
UBE3AQ05086 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.51□□□□□ -1.21
UBE3AQ05086 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.51□□□□□ -1.21
UBE3AQ05086 RN7SL390P-201ENST00000470634 284 ntBASIC7.51□□□□□ -1.21
UBE3AQ05086 RPS3AP49-201ENST00000472161 790 ntBASIC7.51□□□□□ -1.21
UBE3AQ05086 AP005202.1-201ENST00000489915 867 ntBASIC7.51□□□□□ -1.21
UBE3AQ05086 AC015524.1-201ENST00000491585 472 ntBASIC7.51□□□□□ -1.21
UBE3AQ05086 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.51□□□□□ -1.21
UBE3AQ05086 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.51□□□□□ -1.21
UBE3AQ05086 ST13P6-201ENST00000522430 1102 ntBASIC7.51□□□□□ -1.21
UBE3AQ05086 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
UBE3AQ05086 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.51□□□□□ -1.21
UBE3AQ05086 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.51□□□□□ -1.21
UBE3AQ05086 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.51□□□□□ -1.21
UBE3AQ05086 NDUFB9P1-201ENST00000604683 510 ntBASIC7.51□□□□□ -1.21
UBE3AQ05086 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.51□□□□□ -1.21
UBE3AQ05086 AL591926.1-201ENST00000620542 217 ntBASIC7.51□□□□□ -1.21
UBE3AQ05086 AC073857.1-201ENST00000625082 1054 ntBASIC7.51□□□□□ -1.21
UBE3AQ05086 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.51□□□□□ -1.21
UBE3AQ05086 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 AC099654.3-201ENST00000447087 1546 ntBASIC7.51□□□□□ -1.21
UBE3AQ05086 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 AC104581.5-201ENST00000624171 7141 ntBASIC7.51□□□□□ -1.21
UBE3AQ05086 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
UBE3AQ05086 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.51□□□□□ -1.21
UBE3AQ05086 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
UBE3AQ05086 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
UBE3AQ05086 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
UBE3AQ05086 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
UBE3AQ05086 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
UBE3AQ05086 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
UBE3AQ05086 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC7.5□□□□□ -1.21
UBE3AQ05086 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
UBE3AQ05086 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.5□□□□□ -1.21
UBE3AQ05086 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
UBE3AQ05086 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.5□□□□□ -1.21
UBE3AQ05086 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
UBE3AQ05086 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms