Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 AL354707.3-201ENST00000427308 331 ntBASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 AC011352.2-201ENST00000514574 1016 ntBASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 CYCSP25-201ENST00000525280 316 ntBASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 MBP-206ENST00000397863 4800 ntTSL 3 BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 COL12A1-207ENST00000483888 9637 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
CDC42BPAQ5VT25 ARHGAP19-201ENST00000358308 5390 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 RNA5SP485-201ENST00000365053 119 ntBASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 AC112492.2-201ENST00000432774 1030 ntBASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 PFN2-209ENST00000481275 560 ntTSL 4 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 RN7SKP35-201ENST00000517210 151 ntBASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 TRIM77BP-201ENST00000524985 1119 ntBASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 ASB8-203ENST00000535988 679 ntTSL 2 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 AC016144.1-201ENST00000548175 1087 ntBASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 AC087575.1-201ENST00000585087 229 ntBASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 FAM83F-201ENST00000333407 15561 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 EEF1A1P12-201ENST00000443590 1346 ntBASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC10.11□□□□□ -0.79
CDC42BPAQ5VT25 RFT1-201ENST00000296292 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 LCN1P2-201ENST00000372030 223 ntBASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 AC066692.1-201ENST00000421721 457 ntBASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 RBMY3AP-201ENST00000449381 1145 ntBASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 RPL5P14-201ENST00000494197 878 ntBASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 CBX1-205ENST00000495350 550 ntTSL 2 BASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 AP005136.2-201ENST00000583253 1049 ntBASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 SNX18P10-201ENST00000625014 519 ntBASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 ERN1-201ENST00000433197 7876 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 AC087392.3-202ENST00000358446 1754 ntBASIC10.1□□□□□ -0.79
CDC42BPAQ5VT25 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms