RNA–Protein interactions for RNA: ENST00000391828.7

NLRP3-206, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 3,853 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-206ENST00000391828 NISCHQ9Y2I1 1504 aa15.53■□□□□ 0.08
NLRP3-206ENST00000391828 DCAF8L2P0C7V8 631 aa14.6□□□□□ -0.07
NLRP3-206ENST00000391828 SUPT5HO00267 1087 aaKnown RBP14.45□□□□□ -0.1
NLRP3-206ENST00000391828 SHROOM4Q9ULL8 1493 aa14.43□□□□□ -0.1
NLRP3-206ENST00000391828 PCGF6Q9BYE7 350 aa13.7□□□□□ -0.22
NLRP3-206ENST00000391828 EHMT2Q96KQ7 1210 aa13.69□□□□□ -0.22
NLRP3-206ENST00000391828 HRCP23327 699 aa13.58□□□□□ -0.24
NLRP3-206ENST00000391828 FAM9AQ8IZU1 332 aaPredicted RBP13.52□□□□□ -0.25
NLRP3-206ENST00000391828 CHIC1Q5VXU3 224 aa13.47□□□□□ -0.25
NLRP3-206ENST00000391828 PELP1Q8IZL8 1130 aaKnown RBP13.44□□□□□ -0.26
NLRP3-206ENST00000391828 LOC105371045A0A1W2PR82 267 aa13.38□□□□□ -0.27
NLRP3-206ENST00000391828 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
NLRP3-206ENST00000391828 PPARGC1BQ86YN6 1023 aaKnown RBP13.25□□□□□ -0.29
NLRP3-206ENST00000391828 TTBK1Q5TCY1 1321 aaPredicted RBP13.23□□□□□ -0.29
NLRP3-206ENST00000391828 TRIM26Q12899 539 aaPredicted RBP13.12□□□□□ -0.31
NLRP3-206ENST00000391828 MYT1Q01538 1121 aa13.06□□□□□ -0.32
NLRP3-206ENST00000391828 ZEB1P37275 1124 aaPredicted RBP13.05□□□□□ -0.32
NLRP3-206ENST00000391828 MYO15BQ96JP2 1530 aa13.03□□□□□ -0.32
NLRP3-206ENST00000391828 CCER1Q8TC90 406 aaPredicted RBP13□□□□□ -0.33
NLRP3-206ENST00000391828 ZCCHC6Q5VYS8 1495 aaKnown RBP12.99□□□□□ -0.33
NLRP3-206ENST00000391828 DCAF1Q9Y4B6 1507 aa12.97□□□□□ -0.33
NLRP3-206ENST00000391828 RANGAP1P46060 587 aaPredicted RBP12.94□□□□□ -0.34
NLRP3-206ENST00000391828 UBTFP17480 764 aaKnown RBP12.89□□□□□ -0.35
NLRP3-206ENST00000391828 APLP2Q06481 763 aa12.87□□□□□ -0.35
NLRP3-206ENST00000391828 ABCC9O60706 1549 aa12.85□□□□□ -0.35
NLRP3-206ENST00000391828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.8□□□□□ -0.36
NLRP3-206ENST00000391828 CCDC180Q9P1Z9 1646 aa12.73□□□□□ -0.37
NLRP3-206ENST00000391828 SCAF1Q9H7N4 1312 aaKnown RBP12.72□□□□□ -0.37
NLRP3-206ENST00000391828 CENPBP07199 599 aaPredicted RBP12.72□□□□□ -0.37
NLRP3-206ENST00000391828 YTHDC1Q96MU7 727 aaKnown RBP12.71□□□□□ -0.38
NLRP3-206ENST00000391828 HNRNPUL2Q1KMD3 747 aaKnown RBP12.64□□□□□ -0.39
NLRP3-206ENST00000391828 PABPN1Q86U42 306 aaKnown RBP eCLIP12.58□□□□□ -0.4
NLRP3-206ENST00000391828 ACIN1Q9UKV3 1341 aaKnown RBP12.57□□□□□ -0.4
NLRP3-206ENST00000391828 SCRIBQ14160 1630 aa12.57□□□□□ -0.4
NLRP3-206ENST00000391828 DIEXFQ68CQ4 756 aaKnown RBP12.56□□□□□ -0.4
NLRP3-206ENST00000391828 ATP1B4Q9UN42 357 aaPredicted RBP12.52□□□□□ -0.4
NLRP3-206ENST00000391828 RSF1Q96T23 1441 aaPredicted RBP12.52□□□□□ -0.41
NLRP3-206ENST00000391828 ITGAEP38570 1179 aa12.48□□□□□ -0.41
NLRP3-206ENST00000391828 GTF3C3Q9Y5Q9 886 aa12.48□□□□□ -0.41
NLRP3-206ENST00000391828 NEUROD1Q13562 356 aa12.45□□□□□ -0.42
NLRP3-206ENST00000391828 CSRNP3Q8WYN3 585 aa12.42□□□□□ -0.42
NLRP3-206ENST00000391828 ZNF316A6NFI3 1004 aaPredicted RBP12.32□□□□□ -0.44
NLRP3-206ENST00000391828 CECR2Q9BXF3 1484 aa12.31□□□□□ -0.44
NLRP3-206ENST00000391828 RB1CC1Q8TDY2 1594 aa12.22□□□□□ -0.45
NLRP3-206ENST00000391828 FAM50AQ14320 339 aaKnown RBP12.16□□□□□ -0.46
NLRP3-206ENST00000391828 CEP162Q5TB80 1403 aa12.15□□□□□ -0.46
NLRP3-206ENST00000391828 MROH2BQ7Z745 1585 aa12.15□□□□□ -0.46
NLRP3-206ENST00000391828 NEFLP07196 543 aa12.13□□□□□ -0.47
NLRP3-206ENST00000391828 MIER1Q8N108 512 aa12.12□□□□□ -0.47
NLRP3-206ENST00000391828 P3H3Q8IVL6 736 aa12.11□□□□□ -0.47
NLRP3-206ENST00000391828 SOGA1O94964 1423 aa12.1□□□□□ -0.47
NLRP3-206ENST00000391828 NACADO15069 1562 aa12.07□□□□□ -0.48
NLRP3-206ENST00000391828 BCANQ96GW7 911 aa12.06□□□□□ -0.48
NLRP3-206ENST00000391828 TNIKQ9UKE5 1360 aa12.05□□□□□ -0.48
NLRP3-206ENST00000391828 CLIP1P30622 1438 aa12.05□□□□□ -0.48
NLRP3-206ENST00000391828 CLSPNQ9HAW4 1339 aa12.04□□□□□ -0.48
NLRP3-206ENST00000391828 CNGB1Q14028 1251 aaPredicted RBP12.04□□□□□ -0.48
NLRP3-206ENST00000391828 CCDC88BA6NC98 1476 aa12.03□□□□□ -0.48
NLRP3-206ENST00000391828 ABCC8Q09428 1581 aa12.02□□□□□ -0.49
NLRP3-206ENST00000391828 WRNQ14191 1432 aaPredicted RBP eCLIP12.01□□□□□ -0.49
NLRP3-206ENST00000391828 BAZ1AQ9NRL2 1556 aaPredicted RBP11.99□□□□□ -0.49
NLRP3-206ENST00000391828 WIZO95785 1651 aa11.98□□□□□ -0.49
NLRP3-206ENST00000391828 GOLGA3Q08378 1498 aa11.98□□□□□ -0.49
NLRP3-206ENST00000391828 POLR3GLQ9BT43 218 aa11.98□□□□□ -0.49
NLRP3-206ENST00000391828 ERICH6Q7L0X2 663 aa11.97□□□□□ -0.49
NLRP3-206ENST00000391828 EEA1Q15075 1411 aa11.96□□□□□ -0.49
NLRP3-206ENST00000391828 DDX10Q13206 875 aaKnown RBP11.93□□□□□ -0.5
NLRP3-206ENST00000391828 BCL11AQ9H165 835 aa11.93□□□□□ -0.5
NLRP3-206ENST00000391828 TRIM52Q96A61 297 aa11.92□□□□□ -0.5
NLRP3-206ENST00000391828 HIRIP3Q9BW71 556 aaPredicted RBP11.92□□□□□ -0.5
NLRP3-206ENST00000391828 ARID3CA6NKF2 412 aa11.9□□□□□ -0.5
NLRP3-206ENST00000391828 RUSC2Q8N2Y8 1516 aa11.9□□□□□ -0.5
NLRP3-206ENST00000391828 ANP32CO43423 234 aa11.89□□□□□ -0.51
NLRP3-206ENST00000391828 ANP32EQ9BTT0 268 aa11.88□□□□□ -0.51
NLRP3-206ENST00000391828 CEP164Q9UPV0 1460 aa11.87□□□□□ -0.51
NLRP3-206ENST00000391828 KANK4Q5T7N3 995 aaPredicted RBP11.84□□□□□ -0.51
NLRP3-206ENST00000391828 SUPT16HQ9Y5B9 1047 aaKnown RBP11.84□□□□□ -0.51
NLRP3-206ENST00000391828 FKBP8Q14318 412 aa11.83□□□□□ -0.52
NLRP3-206ENST00000391828 BAZ1BQ9UIG0 1483 aaKnown RBP11.83□□□□□ -0.52
NLRP3-206ENST00000391828 SIN3AQ96ST3 1273 aa11.79□□□□□ -0.52
NLRP3-206ENST00000391828 VPS8Q8N3P4 1428 aa11.78□□□□□ -0.52
NLRP3-206ENST00000391828 ZNF326Q5BKZ1 582 aaKnown RBP11.78□□□□□ -0.52
NLRP3-206ENST00000391828 TOP2AP11388 1531 aaKnown RBP11.77□□□□□ -0.52
NLRP3-206ENST00000391828 CHIC2Q9UKJ5 165 aa11.77□□□□□ -0.53
NLRP3-206ENST00000391828 TONSLQ96HA7 1378 aa11.75□□□□□ -0.53
NLRP3-206ENST00000391828 TSHZ2Q9NRE2 1034 aa11.75□□□□□ -0.53
NLRP3-206ENST00000391828 KIF27Q86VH2 1401 aa11.73□□□□□ -0.53
NLRP3-206ENST00000391828 RAPGEF2Q9Y4G8 1499 aa11.72□□□□□ -0.53
NLRP3-206ENST00000391828 HNRNPUQ00839 825 aaKnown RBP eCLIP11.72□□□□□ -0.53
NLRP3-206ENST00000391828 DNAJC5BQ9UF47 199 aa11.71□□□□□ -0.53
NLRP3-206ENST00000391828 CCNB3Q8WWL7 1395 aa11.7□□□□□ -0.54
NLRP3-206ENST00000391828 FBLN2P98095 1184 aa11.68□□□□□ -0.54
NLRP3-206ENST00000391828 SMARCA4P51532 1647 aa11.68□□□□□ -0.54
NLRP3-206ENST00000391828 IRX6P78412 446 aaPredicted RBP11.68□□□□□ -0.54
NLRP3-206ENST00000391828 RRP7BPQ9NSQ0 103 aa11.67□□□□□ -0.54
NLRP3-206ENST00000391828 MTUS2Q5JR59 1369 aa11.66□□□□□ -0.54
NLRP3-206ENST00000391828 CDK11AQ9UQ88 783 aaPredicted RBP11.66□□□□□ -0.54
NLRP3-206ENST00000391828 FAM9BQ8IZU0 186 aa11.66□□□□□ -0.54
NLRP3-206ENST00000391828 SMARCA2P51531 1590 aa11.66□□□□□ -0.54
NLRP3-206ENST00000391828 ZNF777Q9ULD5 760 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms