RNA–Protein interactions for RNA: ENST00000296292.7

RFT1-201, Transcript of RFT1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFT1, Length 5,108 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1-201ENST00000296292 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
RFT1-201ENST00000296292 NISCHQ9Y2I1 1504 aa15.78■□□□□ 0.12
RFT1-201ENST00000296292 SUPT5HO00267 1087 aaKnown RBP15.33■□□□□ 0.04
RFT1-201ENST00000296292 SHROOM4Q9ULL8 1493 aa15.2■□□□□ 0.02
RFT1-201ENST00000296292 EHMT2Q96KQ7 1210 aa14.82□□□□□ -0.04
RFT1-201ENST00000296292 FAM9AQ8IZU1 332 aaPredicted RBP14.46□□□□□ -0.09
RFT1-201ENST00000296292 APLP2Q06481 763 aa14.26□□□□□ -0.13
RFT1-201ENST00000296292 TTBK1Q5TCY1 1321 aaPredicted RBP14.23□□□□□ -0.13
RFT1-201ENST00000296292 RANGAP1P46060 587 aaPredicted RBP14.22□□□□□ -0.13
RFT1-201ENST00000296292 TRIM41Q8WV44 630 aa14.14□□□□□ -0.15
RFT1-201ENST00000296292 ATP1B4Q9UN42 357 aaPredicted RBP14.02□□□□□ -0.17
RFT1-201ENST00000296292 PCGF6Q9BYE7 350 aa13.97□□□□□ -0.17
RFT1-201ENST00000296292 UBTFP17480 764 aaKnown RBP13.97□□□□□ -0.17
RFT1-201ENST00000296292 ABCC9O60706 1549 aa13.9□□□□□ -0.18
RFT1-201ENST00000296292 PABPN1Q86U42 306 aaKnown RBP eCLIP13.8□□□□□ -0.2
RFT1-201ENST00000296292 PPARGC1BQ86YN6 1023 aaKnown RBP13.78□□□□□ -0.2
RFT1-201ENST00000296292 CCER1Q8TC90 406 aaPredicted RBP13.69□□□□□ -0.22
RFT1-201ENST00000296292 LOC105371045A0A1W2PR82 267 aa13.62□□□□□ -0.23
RFT1-201ENST00000296292 CHIC1Q5VXU3 224 aa13.59□□□□□ -0.23
RFT1-201ENST00000296292 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.58□□□□□ -0.24
RFT1-201ENST00000296292 HNRNPUL2Q1KMD3 747 aaKnown RBP13.58□□□□□ -0.24
RFT1-201ENST00000296292 ITGAEP38570 1179 aa13.52□□□□□ -0.24
RFT1-201ENST00000296292 MYT1LQ9UL68 1186 aa13.46□□□□□ -0.25
RFT1-201ENST00000296292 ZEB1P37275 1124 aaPredicted RBP13.44□□□□□ -0.26
RFT1-201ENST00000296292 PELP1Q8IZL8 1130 aaKnown RBP13.43□□□□□ -0.26
RFT1-201ENST00000296292 TRIM26Q12899 539 aaPredicted RBP13.36□□□□□ -0.27
RFT1-201ENST00000296292 CCDC180Q9P1Z9 1646 aa13.28□□□□□ -0.28
RFT1-201ENST00000296292 FBLN2P98095 1184 aa13.27□□□□□ -0.28
RFT1-201ENST00000296292 YTHDC1Q96MU7 727 aaKnown RBP13.26□□□□□ -0.29
RFT1-201ENST00000296292 CENPBP07199 599 aaPredicted RBP13.25□□□□□ -0.29
RFT1-201ENST00000296292 POLR3GLQ9BT43 218 aa13.23□□□□□ -0.29
RFT1-201ENST00000296292 CNGB1Q14028 1251 aaPredicted RBP13.18□□□□□ -0.3
RFT1-201ENST00000296292 FAM50AQ14320 339 aaKnown RBP13.16□□□□□ -0.3
RFT1-201ENST00000296292 SCRIBQ14160 1630 aa13.12□□□□□ -0.31
RFT1-201ENST00000296292 P3H3Q8IVL6 736 aa13.11□□□□□ -0.31
RFT1-201ENST00000296292 ARID3CA6NKF2 412 aa13.09□□□□□ -0.31
RFT1-201ENST00000296292 RB1CC1Q8TDY2 1594 aa13.08□□□□□ -0.31
RFT1-201ENST00000296292 HRCP23327 699 aa13.08□□□□□ -0.32
RFT1-201ENST00000296292 TRIM52Q96A61 297 aa13.04□□□□□ -0.32
RFT1-201ENST00000296292 NEFLP07196 543 aa13.04□□□□□ -0.32
RFT1-201ENST00000296292 CSRNP3Q8WYN3 585 aa13.03□□□□□ -0.32
RFT1-201ENST00000296292 ZCCHC6Q5VYS8 1495 aaKnown RBP13.01□□□□□ -0.33
RFT1-201ENST00000296292 SLC4A1APQ9BWU0 796 aaKnown RBP12.99□□□□□ -0.33
RFT1-201ENST00000296292 NEUROD1Q13562 356 aa12.97□□□□□ -0.33
RFT1-201ENST00000296292 ERICH6Q7L0X2 663 aa12.92□□□□□ -0.34
RFT1-201ENST00000296292 ZNF326Q5BKZ1 582 aaKnown RBP12.9□□□□□ -0.34
RFT1-201ENST00000296292 NACADO15069 1562 aa12.89□□□□□ -0.35
RFT1-201ENST00000296292 ZNF777Q9ULD5 760 aaPredicted RBP12.88□□□□□ -0.35
RFT1-201ENST00000296292 DIEXFQ68CQ4 756 aaKnown RBP12.79□□□□□ -0.36
RFT1-201ENST00000296292 CDK11AQ9UQ88 783 aaPredicted RBP12.77□□□□□ -0.37
RFT1-201ENST00000296292 BCANQ96GW7 911 aa12.72□□□□□ -0.37
RFT1-201ENST00000296292 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.38
RFT1-201ENST00000296292 CHMP7Q8WUX9 453 aaPredicted RBP12.7□□□□□ -0.38
RFT1-201ENST00000296292 PLPPR3Q6T4P5 718 aa12.68□□□□□ -0.38
RFT1-201ENST00000296292 RSF1Q96T23 1441 aaPredicted RBP12.67□□□□□ -0.38
RFT1-201ENST00000296292 CHIC2Q9UKJ5 165 aa12.65□□□□□ -0.38
RFT1-201ENST00000296292 ESF1Q9H501 851 aaKnown RBP12.62□□□□□ -0.39
RFT1-201ENST00000296292 CHGAP10645 457 aaKnown RBP12.62□□□□□ -0.39
RFT1-201ENST00000296292 ANP32CO43423 234 aa12.59□□□□□ -0.39
RFT1-201ENST00000296292 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.58□□□□□ -0.4
RFT1-201ENST00000296292 DAXXQ9UER7 740 aaPredicted RBP12.57□□□□□ -0.4
RFT1-201ENST00000296292 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
RFT1-201ENST00000296292 KCNH8Q96L42 1107 aa12.55□□□□□ -0.4
RFT1-201ENST00000296292 STAG3Q9UJ98 1225 aa12.55□□□□□ -0.4
RFT1-201ENST00000296292 BAZ1BQ9UIG0 1483 aaKnown RBP12.55□□□□□ -0.4
RFT1-201ENST00000296292 CLSPNQ9HAW4 1339 aa12.53□□□□□ -0.4
RFT1-201ENST00000296292 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
RFT1-201ENST00000296292 SLC24A1O60721 1099 aa12.52□□□□□ -0.4
RFT1-201ENST00000296292 TSPY4P0CV99 314 aa12.52□□□□□ -0.4
RFT1-201ENST00000296292 TSPY10P0CW01 314 aa12.52□□□□□ -0.4
RFT1-201ENST00000296292 MTUS2Q5JR59 1369 aa12.52□□□□□ -0.41
RFT1-201ENST00000296292 WRNQ14191 1432 aaPredicted RBP eCLIP12.49□□□□□ -0.41
RFT1-201ENST00000296292 CLIP1P30622 1438 aa12.49□□□□□ -0.41
RFT1-201ENST00000296292 TONSLQ96HA7 1378 aa12.47□□□□□ -0.41
RFT1-201ENST00000296292 ERCC6Q03468 1493 aa12.46□□□□□ -0.41
RFT1-201ENST00000296292 BCL11AQ9H165 835 aa12.46□□□□□ -0.41
RFT1-201ENST00000296292 SENP3Q9H4L4 574 aaPredicted RBP12.46□□□□□ -0.42
RFT1-201ENST00000296292 RRP7BPQ9NSQ0 103 aa12.44□□□□□ -0.42
RFT1-201ENST00000296292 KDM2AQ9Y2K7 1162 aa12.44□□□□□ -0.42
RFT1-201ENST00000296292 PLEKHD1A6NEE1 506 aa12.44□□□□□ -0.42
RFT1-201ENST00000296292 DCAF1Q9Y4B6 1507 aa12.44□□□□□ -0.42
RFT1-201ENST00000296292 NEFMP07197 916 aa12.4□□□□□ -0.42
RFT1-201ENST00000296292 DDX10Q13206 875 aaKnown RBP12.4□□□□□ -0.42
RFT1-201ENST00000296292 MYO15BQ96JP2 1530 aa12.4□□□□□ -0.42
RFT1-201ENST00000296292 KIF27Q86VH2 1401 aa12.39□□□□□ -0.43
RFT1-201ENST00000296292 BAZ1AQ9NRL2 1556 aaPredicted RBP12.38□□□□□ -0.43
RFT1-201ENST00000296292 HIRIP3Q9BW71 556 aaPredicted RBP12.37□□□□□ -0.43
RFT1-201ENST00000296292 GTF3C3Q9Y5Q9 886 aa12.36□□□□□ -0.43
RFT1-201ENST00000296292 CEP162Q5TB80 1403 aa12.36□□□□□ -0.43
RFT1-201ENST00000296292 CANXP27824 592 aaKnown RBP12.35□□□□□ -0.43
RFT1-201ENST00000296292 GOLGA3Q08378 1498 aa12.34□□□□□ -0.43
RFT1-201ENST00000296292 EEA1Q15075 1411 aa12.34□□□□□ -0.43
RFT1-201ENST00000296292 CFDP1Q9UEE9 299 aaPredicted RBP12.34□□□□□ -0.43
RFT1-201ENST00000296292 DNAJC5BQ9UF47 199 aa12.34□□□□□ -0.43
RFT1-201ENST00000296292 SALL2Q9Y467 1007 aaPredicted RBP12.33□□□□□ -0.44
RFT1-201ENST00000296292 RGL3Q3MIN7 710 aa12.32□□□□□ -0.44
RFT1-201ENST00000296292 ZBTB47Q9UFB7 747 aaPredicted RBP12.32□□□□□ -0.44
RFT1-201ENST00000296292 FAM9BQ8IZU0 186 aa12.3□□□□□ -0.44
RFT1-201ENST00000296292 MROH2BQ7Z745 1585 aa12.29□□□□□ -0.44
RFT1-201ENST00000296292 ARID4BQ4LE39 1312 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms