RNA–Protein interactions for RNA: ENST00000296292.7

RFT1-201, Transcript of RFT1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFT1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1-201ENST00000296292 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
RFT1-201ENST00000296292 NISCHQ9Y2I1 1504 aa15.78■□□□□ 0.12
RFT1-201ENST00000296292 SUPT5HO00267 1087 aaKnown RBP15.33■□□□□ 0.04
RFT1-201ENST00000296292 SHROOM4Q9ULL8 1493 aa15.2■□□□□ 0.02
RFT1-201ENST00000296292 EHMT2Q96KQ7 1210 aa14.82□□□□□ -0.04
RFT1-201ENST00000296292 FAM9AQ8IZU1 332 aaPredicted RBP14.46□□□□□ -0.09
RFT1-201ENST00000296292 APLP2Q06481 763 aa14.26□□□□□ -0.13
RFT1-201ENST00000296292 TTBK1Q5TCY1 1321 aaPredicted RBP14.23□□□□□ -0.13
RFT1-201ENST00000296292 RANGAP1P46060 587 aaPredicted RBP14.22□□□□□ -0.13
RFT1-201ENST00000296292 TRIM41Q8WV44 630 aa14.14□□□□□ -0.15
RFT1-201ENST00000296292 ATP1B4Q9UN42 357 aaPredicted RBP14.02□□□□□ -0.17
RFT1-201ENST00000296292 PCGF6Q9BYE7 350 aa13.97□□□□□ -0.17
RFT1-201ENST00000296292 UBTFP17480 764 aaKnown RBP13.97□□□□□ -0.17
RFT1-201ENST00000296292 ABCC9O60706 1549 aa13.9□□□□□ -0.18
RFT1-201ENST00000296292 PABPN1Q86U42 306 aaKnown RBP eCLIP13.8□□□□□ -0.2
RFT1-201ENST00000296292 PPARGC1BQ86YN6 1023 aaKnown RBP13.78□□□□□ -0.2
RFT1-201ENST00000296292 CCER1Q8TC90 406 aaPredicted RBP13.69□□□□□ -0.22
RFT1-201ENST00000296292 LOC105371045A0A1W2PR82 267 aa13.62□□□□□ -0.23
RFT1-201ENST00000296292 CHIC1Q5VXU3 224 aa13.59□□□□□ -0.23
RFT1-201ENST00000296292 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.58□□□□□ -0.24
RFT1-201ENST00000296292 HNRNPUL2Q1KMD3 747 aaKnown RBP13.58□□□□□ -0.24
RFT1-201ENST00000296292 ITGAEP38570 1179 aa13.52□□□□□ -0.24
RFT1-201ENST00000296292 MYT1LQ9UL68 1186 aa13.46□□□□□ -0.25
RFT1-201ENST00000296292 ZEB1P37275 1124 aaPredicted RBP13.44□□□□□ -0.26
RFT1-201ENST00000296292 PELP1Q8IZL8 1130 aaKnown RBP13.43□□□□□ -0.26
RFT1-201ENST00000296292 TRIM26Q12899 539 aaPredicted RBP13.36□□□□□ -0.27
RFT1-201ENST00000296292 CCDC180Q9P1Z9 1646 aa13.28□□□□□ -0.28
RFT1-201ENST00000296292 FBLN2P98095 1184 aa13.27□□□□□ -0.28
RFT1-201ENST00000296292 YTHDC1Q96MU7 727 aaKnown RBP13.26□□□□□ -0.29
RFT1-201ENST00000296292 CENPBP07199 599 aaPredicted RBP13.25□□□□□ -0.29
RFT1-201ENST00000296292 POLR3GLQ9BT43 218 aa13.23□□□□□ -0.29
RFT1-201ENST00000296292 CNGB1Q14028 1251 aaPredicted RBP13.18□□□□□ -0.3
RFT1-201ENST00000296292 FAM50AQ14320 339 aaKnown RBP13.16□□□□□ -0.3
RFT1-201ENST00000296292 SCRIBQ14160 1630 aa13.12□□□□□ -0.31
RFT1-201ENST00000296292 P3H3Q8IVL6 736 aa13.11□□□□□ -0.31
RFT1-201ENST00000296292 ARID3CA6NKF2 412 aa13.09□□□□□ -0.31
RFT1-201ENST00000296292 RB1CC1Q8TDY2 1594 aa13.08□□□□□ -0.31
RFT1-201ENST00000296292 HRCP23327 699 aa13.08□□□□□ -0.32
RFT1-201ENST00000296292 TRIM52Q96A61 297 aa13.04□□□□□ -0.32
RFT1-201ENST00000296292 NEFLP07196 543 aa13.04□□□□□ -0.32
RFT1-201ENST00000296292 CSRNP3Q8WYN3 585 aa13.03□□□□□ -0.32
RFT1-201ENST00000296292 ZCCHC6Q5VYS8 1495 aaKnown RBP13.01□□□□□ -0.33
RFT1-201ENST00000296292 SLC4A1APQ9BWU0 796 aaKnown RBP12.99□□□□□ -0.33
RFT1-201ENST00000296292 NEUROD1Q13562 356 aa12.97□□□□□ -0.33
RFT1-201ENST00000296292 ERICH6Q7L0X2 663 aa12.92□□□□□ -0.34
RFT1-201ENST00000296292 ZNF326Q5BKZ1 582 aaKnown RBP12.9□□□□□ -0.34
RFT1-201ENST00000296292 NACADO15069 1562 aa12.89□□□□□ -0.35
RFT1-201ENST00000296292 ZNF777Q9ULD5 760 aaPredicted RBP12.88□□□□□ -0.35
RFT1-201ENST00000296292 DIEXFQ68CQ4 756 aaKnown RBP12.79□□□□□ -0.36
RFT1-201ENST00000296292 CDK11AQ9UQ88 783 aaPredicted RBP12.77□□□□□ -0.37
RFT1-201ENST00000296292 BCANQ96GW7 911 aa12.72□□□□□ -0.37
RFT1-201ENST00000296292 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.38
RFT1-201ENST00000296292 CHMP7Q8WUX9 453 aaPredicted RBP12.7□□□□□ -0.38
RFT1-201ENST00000296292 PLPPR3Q6T4P5 718 aa12.68□□□□□ -0.38
RFT1-201ENST00000296292 RSF1Q96T23 1441 aaPredicted RBP12.67□□□□□ -0.38
RFT1-201ENST00000296292 CHIC2Q9UKJ5 165 aa12.65□□□□□ -0.38
RFT1-201ENST00000296292 ESF1Q9H501 851 aaKnown RBP12.62□□□□□ -0.39
RFT1-201ENST00000296292 CHGAP10645 457 aaKnown RBP12.62□□□□□ -0.39
RFT1-201ENST00000296292 ANP32CO43423 234 aa12.59□□□□□ -0.39
RFT1-201ENST00000296292 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.58□□□□□ -0.4
RFT1-201ENST00000296292 DAXXQ9UER7 740 aaPredicted RBP12.57□□□□□ -0.4
RFT1-201ENST00000296292 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
RFT1-201ENST00000296292 KCNH8Q96L42 1107 aa12.55□□□□□ -0.4
RFT1-201ENST00000296292 STAG3Q9UJ98 1225 aa12.55□□□□□ -0.4
RFT1-201ENST00000296292 BAZ1BQ9UIG0 1483 aaKnown RBP12.55□□□□□ -0.4
RFT1-201ENST00000296292 CLSPNQ9HAW4 1339 aa12.53□□□□□ -0.4
RFT1-201ENST00000296292 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
RFT1-201ENST00000296292 SLC24A1O60721 1099 aa12.52□□□□□ -0.4
RFT1-201ENST00000296292 TSPY4P0CV99 314 aa12.52□□□□□ -0.4
RFT1-201ENST00000296292 TSPY10P0CW01 314 aa12.52□□□□□ -0.4
RFT1-201ENST00000296292 MTUS2Q5JR59 1369 aa12.52□□□□□ -0.41
RFT1-201ENST00000296292 WRNQ14191 1432 aaPredicted RBP eCLIP12.49□□□□□ -0.41
RFT1-201ENST00000296292 CLIP1P30622 1438 aa12.49□□□□□ -0.41
RFT1-201ENST00000296292 TONSLQ96HA7 1378 aa12.47□□□□□ -0.41
RFT1-201ENST00000296292 ERCC6Q03468 1493 aa12.46□□□□□ -0.41
RFT1-201ENST00000296292 BCL11AQ9H165 835 aa12.46□□□□□ -0.41
RFT1-201ENST00000296292 SENP3Q9H4L4 574 aaPredicted RBP12.46□□□□□ -0.42
RFT1-201ENST00000296292 RRP7BPQ9NSQ0 103 aa12.44□□□□□ -0.42
RFT1-201ENST00000296292 KDM2AQ9Y2K7 1162 aa12.44□□□□□ -0.42
RFT1-201ENST00000296292 PLEKHD1A6NEE1 506 aa12.44□□□□□ -0.42
RFT1-201ENST00000296292 DCAF1Q9Y4B6 1507 aa12.44□□□□□ -0.42
RFT1-201ENST00000296292 NEFMP07197 916 aa12.4□□□□□ -0.42
RFT1-201ENST00000296292 DDX10Q13206 875 aaKnown RBP12.4□□□□□ -0.42
RFT1-201ENST00000296292 MYO15BQ96JP2 1530 aa12.4□□□□□ -0.42
RFT1-201ENST00000296292 KIF27Q86VH2 1401 aa12.39□□□□□ -0.43
RFT1-201ENST00000296292 BAZ1AQ9NRL2 1556 aaPredicted RBP12.38□□□□□ -0.43
RFT1-201ENST00000296292 HIRIP3Q9BW71 556 aaPredicted RBP12.37□□□□□ -0.43
RFT1-201ENST00000296292 GTF3C3Q9Y5Q9 886 aa12.36□□□□□ -0.43
RFT1-201ENST00000296292 CEP162Q5TB80 1403 aa12.36□□□□□ -0.43
RFT1-201ENST00000296292 CANXP27824 592 aaKnown RBP12.35□□□□□ -0.43
RFT1-201ENST00000296292 GOLGA3Q08378 1498 aa12.34□□□□□ -0.43
RFT1-201ENST00000296292 EEA1Q15075 1411 aa12.34□□□□□ -0.43
RFT1-201ENST00000296292 CFDP1Q9UEE9 299 aaPredicted RBP12.34□□□□□ -0.43
RFT1-201ENST00000296292 DNAJC5BQ9UF47 199 aa12.34□□□□□ -0.43
RFT1-201ENST00000296292 SALL2Q9Y467 1007 aaPredicted RBP12.33□□□□□ -0.44
RFT1-201ENST00000296292 RGL3Q3MIN7 710 aa12.32□□□□□ -0.44
RFT1-201ENST00000296292 ZBTB47Q9UFB7 747 aaPredicted RBP12.32□□□□□ -0.44
RFT1-201ENST00000296292 FAM9BQ8IZU0 186 aa12.3□□□□□ -0.44
RFT1-201ENST00000296292 MROH2BQ7Z745 1585 aa12.29□□□□□ -0.44
RFT1-201ENST00000296292 ARID4BQ4LE39 1312 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms