Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC105052.2-201ENST00000434317 794 ntBASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 RN7SL145P-201ENST00000469955 296 ntBASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 OR4A1P-201ENST00000532342 920 ntBASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 OR4N3P-201ENST00000559395 818 ntBASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 MIR4258-201ENST00000580920 91 ntBASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 RN7SL667P-201ENST00000582817 298 ntBASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 PRR13P5-201ENST00000596581 442 ntBASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 AC027271.1-201ENST00000610270 610 ntBASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 uc_338.37-201ENST00000620113 186 ntBASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 AC135068.4-201ENST00000622949 925 ntBASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 HBG1-202ENST00000632727 369 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 AL596275.2-203ENST00000641951 371 ntBASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 AC015871.3-201ENST00000618835 2261 ntBASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 FUNDC2P3-201ENST00000334716 533 ntBASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 NRIR-201ENST00000366140 799 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 MIR199B-201ENST00000384849 110 ntBASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 MIR1231-201ENST00000408101 92 ntBASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 AL627308.2-201ENST00000420014 432 ntBASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 AF274573.1-201ENST00000430535 494 ntBASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 AL161626.1-201ENST00000441480 490 ntBASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 AC093799.1-201ENST00000452411 499 ntBASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 RN7SL88P-201ENST00000480166 299 ntBASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 RN7SL797P-201ENST00000486314 297 ntBASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 AC074386.1-206ENST00000487102 761 ntBASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 PFN2-217ENST00000498307 556 ntTSL 4 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 PGAM4P2-201ENST00000512491 721 ntBASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 SUMO2P19-201ENST00000518920 295 ntBASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 EEF1B2P1-201ENST00000567221 672 ntBASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 AC005070.1-201ENST00000603744 365 ntBASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 AC073862.4-201ENST00000622982 854 ntBASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
HLA-DRB4X5D2U9 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC5.34□□□□□ -1.56
HLA-DRB4X5D2U9 AP000641.1-201ENST00000531988 1639 ntBASIC5.34□□□□□ -1.56
HLA-DRB4X5D2U9 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-DRB4X5D2U9 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms