Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC072039.2-201ENST00000608883 439 ntBASIC8.58□□□□□ -1.04
FOXR1Q6PIV2 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC8.58□□□□□ -1.04
FOXR1Q6PIV2 AC073869.3-201ENST00000609270 580 ntTSL 5 BASIC8.58□□□□□ -1.04
FOXR1Q6PIV2 AC012676.3-201ENST00000614983 479 ntBASIC8.58□□□□□ -1.04
FOXR1Q6PIV2 BSNDP3-201ENST00000617487 364 ntBASIC8.58□□□□□ -1.04
FOXR1Q6PIV2 SERPINB11-209ENST00000624518 573 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
FOXR1Q6PIV2 AC009971.1-201ENST00000634253 673 ntTSL 5 BASIC8.58□□□□□ -1.04
FOXR1Q6PIV2 C7orf71-201ENST00000409974 1956 ntTSL 2 BASIC8.58□□□□□ -1.04
FOXR1Q6PIV2 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
FOXR1Q6PIV2 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
FOXR1Q6PIV2 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
FOXR1Q6PIV2 AC099654.3-201ENST00000447087 1546 ntBASIC8.58□□□□□ -1.04
FOXR1Q6PIV2 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
FOXR1Q6PIV2 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
FOXR1Q6PIV2 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.58□□□□□ -1.04
FOXR1Q6PIV2 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC8.58□□□□□ -1.04
FOXR1Q6PIV2 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC8.58□□□□□ -1.04
FOXR1Q6PIV2 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 MFSD8-217ENST00000641178 4374 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 SSX2B-204ENST00000616191 1344 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 EHHADH-AS1-201ENST00000417720 1416 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 Y_RNA.248-201ENST00000364501 109 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 AC234772.1-201ENST00000377927 937 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 MEG8-201ENST00000414488 800 ntTSL 3 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 NIFKP3-201ENST00000417799 865 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 MTND1P14-201ENST00000427400 950 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 PAICSP3-201ENST00000428007 1168 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 GTF2IP14-201ENST00000441415 586 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 CCRL1P1-201ENST00000449542 1053 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 AC092001.1-201ENST00000453012 261 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 OSBPL10-AS1-207ENST00000455961 411 ntTSL 2 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 AC011037.1-201ENST00000483964 558 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 AC011825.1-201ENST00000484967 388 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 GGTA1P-204ENST00000488429 1104 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 LINC02160-201ENST00000503577 517 ntTSL 3 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 AC112518.2-201ENST00000508565 425 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 CASC16-201ENST00000510238 955 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 BCAS2P1-201ENST00000528022 632 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 AC079064.1-201ENST00000528365 362 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 AC034102.1-201ENST00000552016 604 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 AC138907.5-201ENST00000561744 273 ntTSL 5 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 AC023813.2-201ENST00000564321 469 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 ACTR3BP3-201ENST00000565577 979 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 MRPL45P2-203ENST00000573318 473 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 FAM95B1-209ENST00000590863 789 ntTSL 2 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 AL513479.1-201ENST00000611376 585 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 AC138749.5-201ENST00000611461 208 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 ELMO2P1-202ENST00000614283 794 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 MIR8075-201ENST00000614354 80 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 MTND5P24-201ENST00000438892 1767 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 AC108099.1-201ENST00000564402 3258 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 NR1H5P-201ENST00000452683 1377 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 AC093844.1-201ENST00000514910 1361 ntBASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 INTS4-211ENST00000535943 1382 ntTSL 5 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 BCAT1-206ENST00000539780 1360 ntTSL 2 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
FOXR1Q6PIV2 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
FOXR1Q6PIV2 RPL4P3-201ENST00000428881 1311 ntBASIC8.56□□□□□ -1.04
FOXR1Q6PIV2 AL512662.1-201ENST00000624850 2251 ntBASIC8.56□□□□□ -1.04
FOXR1Q6PIV2 DBIL5P2-202ENST00000491724 1692 ntBASIC8.56□□□□□ -1.04
FOXR1Q6PIV2 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
FOXR1Q6PIV2 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC8.56□□□□□ -1.04
FOXR1Q6PIV2 LINC01180-201ENST00000589259 2025 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
FOXR1Q6PIV2 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC8.56□□□□□ -1.04
FOXR1Q6PIV2 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
FOXR1Q6PIV2 RNA5SP69-201ENST00000364477 117 ntBASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms