Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CCDC187A0A096LP49 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CCDC187A0A096LP49 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC6.96□□□□□ -1.29
CCDC187A0A096LP49 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CCDC187A0A096LP49 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CCDC187A0A096LP49 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
CCDC187A0A096LP49 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CCDC187A0A096LP49 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CCDC187A0A096LP49 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CCDC187A0A096LP49 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
CCDC187A0A096LP49 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CCDC187A0A096LP49 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CCDC187A0A096LP49 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
CCDC187A0A096LP49 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
CCDC187A0A096LP49 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 RNA5SP53-201ENST00000391299 120 ntBASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 AC091492.1-201ENST00000419844 272 ntBASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 CLNS1AP1-201ENST00000435954 682 ntBASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 AC096632.2-201ENST00000438139 1239 ntBASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 AC064862.5-201ENST00000440618 334 ntBASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 AL133372.1-201ENST00000493565 745 ntBASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 RN7SL649P-201ENST00000496974 275 ntBASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 AC147055.1-201ENST00000509261 750 ntBASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 CARSP2-201ENST00000520688 277 ntBASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 AC025857.1-201ENST00000525252 377 ntBASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 BTG1P1-201ENST00000540396 508 ntBASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 AC010287.1-201ENST00000566916 357 ntBASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 MIR4470-201ENST00000583453 72 ntBASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 RPS27AP19-201ENST00000597285 458 ntBASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 AC023818.2-201ENST00000623817 2304 ntBASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 AC011379.1-201ENST00000508713 3025 ntBASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC187A0A096LP49 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 TRIM53CP-201ENST00000531490 1354 ntBASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 LINC00641-202ENST00000555688 1763 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 WNK1-220ENST00000574564 1401 ntBASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 MIR575-201ENST00000385013 94 ntBASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 MTND2P12-201ENST00000417560 1252 ntBASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 AC022080.2-201ENST00000452932 533 ntBASIC6.95□□□□□ -1.3
CCDC187A0A096LP49 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms