Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 FEM1AP4-201ENST00000443167 1987 ntBASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 PLK5-205ENST00000642079 1969 ntBASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
PCDHB7Q9Y5E2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB7Q9Y5E2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB7Q9Y5E2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHB7Q9Y5E2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB7Q9Y5E2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDHB7Q9Y5E2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB7Q9Y5E2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB7Q9Y5E2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB7Q9Y5E2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB7Q9Y5E2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB7Q9Y5E2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.58■■□□□ 1.05
PCDHB7Q9Y5E2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.58■■□□□ 1.04
PCDHB7Q9Y5E2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
PCDHB7Q9Y5E2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB7Q9Y5E2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHB7Q9Y5E2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB7Q9Y5E2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB7Q9Y5E2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.57■■□□□ 1.04
PCDHB7Q9Y5E2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHB7Q9Y5E2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.57■■□□□ 1.04
PCDHB7Q9Y5E2 KSR1P1-201ENST00000446298 240 ntBASIC21.57■■□□□ 1.04
PCDHB7Q9Y5E2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB7Q9Y5E2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB7Q9Y5E2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB7Q9Y5E2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB7Q9Y5E2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB7Q9Y5E2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDHB7Q9Y5E2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB7Q9Y5E2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
PCDHB7Q9Y5E2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHB7Q9Y5E2 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDHB7Q9Y5E2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB7Q9Y5E2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB7Q9Y5E2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PCDHB7Q9Y5E2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB7Q9Y5E2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.56■■□□□ 1.04
PCDHB7Q9Y5E2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB7Q9Y5E2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHB7Q9Y5E2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDHB7Q9Y5E2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHB7Q9Y5E2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDHB7Q9Y5E2 AP000525.1-201ENST00000608286 694 ntBASIC21.56■■□□□ 1.04
PCDHB7Q9Y5E2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHB7Q9Y5E2 AC079598.2-202ENST00000546624 1451 ntBASIC21.56■■□□□ 1.04
PCDHB7Q9Y5E2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB7Q9Y5E2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB7Q9Y5E2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB7Q9Y5E2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB7Q9Y5E2 MIR1238-201ENST00000408483 83 ntBASIC21.55■■□□□ 1.04
PCDHB7Q9Y5E2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB7Q9Y5E2 NIFKP9-201ENST00000419265 221 ntBASIC21.55■■□□□ 1.04
PCDHB7Q9Y5E2 TMPOP1-202ENST00000424642 1267 ntBASIC21.55■■□□□ 1.04
PCDHB7Q9Y5E2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB7Q9Y5E2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB7Q9Y5E2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHB7Q9Y5E2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHB7Q9Y5E2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHB7Q9Y5E2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHB7Q9Y5E2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHB7Q9Y5E2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB7Q9Y5E2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PCDHB7Q9Y5E2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB7Q9Y5E2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB7Q9Y5E2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHB7Q9Y5E2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 AC133561.1-201ENST00000568600 2415 ntBASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 MIR6786-201ENST00000616843 113 ntBASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 KRT16P1-201ENST00000399124 1418 ntBASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 FP700111.2-201ENST00000619190 1892 ntBASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB7Q9Y5E2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PCDHB7Q9Y5E2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDHB7Q9Y5E2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB7Q9Y5E2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PCDHB7Q9Y5E2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB7Q9Y5E2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB7Q9Y5E2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB7Q9Y5E2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PCDHB7Q9Y5E2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms