Protein–RNA interactions for Protein: Q9UMS4

PRPF19, Pre-mRNA-processing factor 19, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19Q9UMS4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPF19Q9UMS4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRPF19Q9UMS4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRPF19Q9UMS4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.04■□□□□ 0.64
PRPF19Q9UMS4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRPF19Q9UMS4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.04■□□□□ 0.64
PRPF19Q9UMS4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.04■□□□□ 0.64
PRPF19Q9UMS4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.04■□□□□ 0.64
PRPF19Q9UMS4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.04■□□□□ 0.64
PRPF19Q9UMS4 MIR4767-201ENST00000582827 78 ntBASIC19.04■□□□□ 0.64
PRPF19Q9UMS4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PRPF19Q9UMS4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRPF19Q9UMS4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRPF19Q9UMS4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.04■□□□□ 0.64
PRPF19Q9UMS4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PRPF19Q9UMS4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRPF19Q9UMS4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRPF19Q9UMS4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.04■□□□□ 0.64
PRPF19Q9UMS4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRPF19Q9UMS4 AC079598.2-202ENST00000546624 1451 ntBASIC19.03■□□□□ 0.64
PRPF19Q9UMS4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.03■□□□□ 0.64
PRPF19Q9UMS4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.03■□□□□ 0.64
PRPF19Q9UMS4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRPF19Q9UMS4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRPF19Q9UMS4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.03■□□□□ 0.64
PRPF19Q9UMS4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.03■□□□□ 0.64
PRPF19Q9UMS4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PRPF19Q9UMS4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.03■□□□□ 0.64
PRPF19Q9UMS4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.03■□□□□ 0.64
PRPF19Q9UMS4 AC120498.10-201ENST00000621827 505 ntBASIC19.03■□□□□ 0.64
PRPF19Q9UMS4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRPF19Q9UMS4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.03■□□□□ 0.64
PRPF19Q9UMS4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRPF19Q9UMS4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRPF19Q9UMS4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRPF19Q9UMS4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRPF19Q9UMS4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
PRPF19Q9UMS4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRPF19Q9UMS4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PRPF19Q9UMS4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19■□□□□ 0.63
PRPF19Q9UMS4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PRPF19Q9UMS4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRPF19Q9UMS4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRPF19Q9UMS4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PRPF19Q9UMS4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRPF19Q9UMS4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRPF19Q9UMS4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRPF19Q9UMS4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PRPF19Q9UMS4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
PRPF19Q9UMS4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PRPF19Q9UMS4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRPF19Q9UMS4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRPF19Q9UMS4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PRPF19Q9UMS4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRPF19Q9UMS4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRPF19Q9UMS4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRPF19Q9UMS4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
PRPF19Q9UMS4 AL356441.2-201ENST00000443009 864 ntBASIC19■□□□□ 0.63
PRPF19Q9UMS4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRPF19Q9UMS4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PRPF19Q9UMS4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms