Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VAPAQ9P0L0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VAPAQ9P0L0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VAPAQ9P0L0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
VAPAQ9P0L0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VAPAQ9P0L0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VAPAQ9P0L0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VAPAQ9P0L0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VAPAQ9P0L0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VAPAQ9P0L0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
VAPAQ9P0L0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VAPAQ9P0L0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.87■□□□□ 0.61
VAPAQ9P0L0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.87■□□□□ 0.61
VAPAQ9P0L0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VAPAQ9P0L0 AC009237.14-201ENST00000609975 1594 ntBASIC18.87■□□□□ 0.61
VAPAQ9P0L0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VAPAQ9P0L0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VAPAQ9P0L0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VAPAQ9P0L0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VAPAQ9P0L0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
VAPAQ9P0L0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
VAPAQ9P0L0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VAPAQ9P0L0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VAPAQ9P0L0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.86■□□□□ 0.61
VAPAQ9P0L0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VAPAQ9P0L0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VAPAQ9P0L0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.86■□□□□ 0.61
VAPAQ9P0L0 TERF1P5-201ENST00000477545 1207 ntBASIC18.86■□□□□ 0.61
VAPAQ9P0L0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.86■□□□□ 0.61
VAPAQ9P0L0 AL591742.1-201ENST00000604433 565 ntBASIC18.86■□□□□ 0.61
VAPAQ9P0L0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VAPAQ9P0L0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.86■□□□□ 0.61
VAPAQ9P0L0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.86■□□□□ 0.61
VAPAQ9P0L0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.86■□□□□ 0.61
VAPAQ9P0L0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
VAPAQ9P0L0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VAPAQ9P0L0 AC004408.2-201ENST00000623613 2777 ntBASIC18.86■□□□□ 0.61
VAPAQ9P0L0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
VAPAQ9P0L0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 Z82202.1-201ENST00000623446 1880 ntBASIC18.84■□□□□ 0.61
VAPAQ9P0L0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 AC010536.3-201ENST00000620306 533 ntBASIC18.84■□□□□ 0.61
VAPAQ9P0L0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VAPAQ9P0L0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VAPAQ9P0L0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.83■□□□□ 0.61
VAPAQ9P0L0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VAPAQ9P0L0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAPAQ9P0L0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAPAQ9P0L0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VAPAQ9P0L0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.83■□□□□ 0.6
VAPAQ9P0L0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.83■□□□□ 0.6
VAPAQ9P0L0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.83■□□□□ 0.6
VAPAQ9P0L0 AC016405.3-201ENST00000607710 860 ntBASIC18.83■□□□□ 0.6
VAPAQ9P0L0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAPAQ9P0L0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAPAQ9P0L0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
VAPAQ9P0L0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.83■□□□□ 0.6
VAPAQ9P0L0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VAPAQ9P0L0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms