Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC098590.1-201ENST00000468126 897 ntBASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 AC007322.3-201ENST00000426526 701 ntBASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 RPS2P52-201ENST00000469610 820 ntBASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 AC142381.4-202ENST00000563973 229 ntBASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 KRT17P1-201ENST00000399211 1546 ntBASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
NCKIPSDQ9NZQ3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKIPSDQ9NZQ3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.16■□□□□ 0.82
NCKIPSDQ9NZQ3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.16■□□□□ 0.82
NCKIPSDQ9NZQ3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.16■□□□□ 0.82
NCKIPSDQ9NZQ3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKIPSDQ9NZQ3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCKIPSDQ9NZQ3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.16■□□□□ 0.82
NCKIPSDQ9NZQ3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.16■□□□□ 0.82
NCKIPSDQ9NZQ3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.16■□□□□ 0.82
NCKIPSDQ9NZQ3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NCKIPSDQ9NZQ3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCKIPSDQ9NZQ3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCKIPSDQ9NZQ3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKIPSDQ9NZQ3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKIPSDQ9NZQ3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCKIPSDQ9NZQ3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKIPSDQ9NZQ3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NCKIPSDQ9NZQ3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKIPSDQ9NZQ3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.16■□□□□ 0.82
NCKIPSDQ9NZQ3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKIPSDQ9NZQ3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.15■□□□□ 0.82
NCKIPSDQ9NZQ3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKIPSDQ9NZQ3 KRT18P68-201ENST00000392293 1000 ntBASIC20.15■□□□□ 0.82
NCKIPSDQ9NZQ3 AL158047.1-201ENST00000445918 881 ntBASIC20.15■□□□□ 0.82
NCKIPSDQ9NZQ3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.15■□□□□ 0.82
NCKIPSDQ9NZQ3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.15■□□□□ 0.82
NCKIPSDQ9NZQ3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NCKIPSDQ9NZQ3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NCKIPSDQ9NZQ3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
NCKIPSDQ9NZQ3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.15■□□□□ 0.82
NCKIPSDQ9NZQ3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NCKIPSDQ9NZQ3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKIPSDQ9NZQ3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.15■□□□□ 0.82
NCKIPSDQ9NZQ3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NCKIPSDQ9NZQ3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NCKIPSDQ9NZQ3 AFG3L1P-217ENST00000557444 2447 ntBASIC20.15■□□□□ 0.82
NCKIPSDQ9NZQ3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.15■□□□□ 0.82
NCKIPSDQ9NZQ3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.15■□□□□ 0.82
NCKIPSDQ9NZQ3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.14■□□□□ 0.82
NCKIPSDQ9NZQ3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
NCKIPSDQ9NZQ3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.14■□□□□ 0.82
NCKIPSDQ9NZQ3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NCKIPSDQ9NZQ3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NCKIPSDQ9NZQ3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NCKIPSDQ9NZQ3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCKIPSDQ9NZQ3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
NCKIPSDQ9NZQ3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCKIPSDQ9NZQ3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCKIPSDQ9NZQ3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCKIPSDQ9NZQ3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCKIPSDQ9NZQ3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.14■□□□□ 0.81
NCKIPSDQ9NZQ3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCKIPSDQ9NZQ3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.14■□□□□ 0.81
NCKIPSDQ9NZQ3 AL355472.2-201ENST00000422958 438 ntBASIC20.14■□□□□ 0.81
NCKIPSDQ9NZQ3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.14■□□□□ 0.81
NCKIPSDQ9NZQ3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCKIPSDQ9NZQ3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCKIPSDQ9NZQ3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.14■□□□□ 0.81
NCKIPSDQ9NZQ3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NCKIPSDQ9NZQ3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCKIPSDQ9NZQ3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NCKIPSDQ9NZQ3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
NCKIPSDQ9NZQ3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCKIPSDQ9NZQ3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.13■□□□□ 0.81
NCKIPSDQ9NZQ3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms